RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 TSPAN10Q9H1Z9 355 aaPredicted RBP13.1□□□□□ -0.31
SLC13A3-205ENST00000417157 IL1RL2Q9HB29 575 aa13.1□□□□□ -0.31
SLC13A3-205ENST00000417157 TAS2R7Q9NYW3 318 aa13.1□□□□□ -0.31
SLC13A3-205ENST00000417157 B4GALT7Q9UBV7 327 aa13.1□□□□□ -0.31
SLC13A3-205ENST00000417157 BOKQ9UMX3 212 aaPredicted RBP13.1□□□□□ -0.31
SLC13A3-205ENST00000417157 NPFFR2Q9Y5X5 522 aa13.1□□□□□ -0.31
SLC13A3-205ENST00000417157 TMEM233B4DJY2 109 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 LSM1O15116 133 aaKnown RBP13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 HS6ST1O60243 411 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 ZNF354AO60765 605 aaPredicted RBP13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 CBX7O95931 251 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 LDLRP01130 860 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 CCL3P10147 92 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 NAGAP17050 411 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 S1PR1P21453 382 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 RPL3P39023 403 aaKnown RBP13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 CA7P43166 264 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 NCBP2P52298 156 aaKnown RBP eCLIP13.09□□□□□ -0.315e-15■□□□□ 11.1
SLC13A3-205ENST00000417157 MRPS35P82673 323 aaKnown RBP13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 MGAT2Q10469 447 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 LTB4RQ15722 352 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 CHI3L2Q15782 390 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 GALNTL6Q49A17 601 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 ATP6AP1LQ52LC2 224 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 C1QL3Q5VWW1 255 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 FAM180BQ6P0A1 224 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 ARHGAP11AQ6P4F7 1023 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 LYPD8Q6UX82 237 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 Q6ZSR9 355 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 FAM109AQ8N4B1 249 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 OR6Y1Q8NGX8 325 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 OR2T11Q8NH01 316 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 ADIPOR1Q96A54 375 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 LCORQ96JN0 433 aaPredicted RBP13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 PKNOX2Q96KN3 472 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 FCRL1Q96LA6 429 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 ITPAQ9BY32 194 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 TTTY12Q9BZ98 90 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 TUBB1Q9H4B7 451 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 SH2D2AQ9NP31 389 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 DEPPQ9NTK1 212 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 TAS2R9Q9NYW1 312 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 PTGDR2Q9Y5Y4 395 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 CHCHD2Q9Y6H1 151 aaPredicted RBP13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 ESPL1Q14674 2120 aa13.09□□□□□ -0.31
SLC13A3-205ENST00000417157 ANKRD33BA6NCL7 494 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 WIPF3A6NGB9 483 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 FRG2CA6NGY1 282 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 MYO1GB0I1T2 1018 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 PRRG2O14669 202 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 PLOD3O60568 738 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 IFI6P09912 130 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 DHRS4L1P0CG22 281 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 PCSK2P16519 638 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 SDC1P18827 310 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 DRD5P21918 477 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 RFC3P40938 356 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 PPICP45877 212 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 PPIAP62937 165 aaKnown RBP13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 DUSP2Q05923 314 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 PLCXD2Q0VAA5 305 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 MAD2L1Q13257 205 aaPredicted RBP13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 EXOSC7Q15024 291 aaKnown RBP13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 HYAL4Q2M3T9 481 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 UGT3A2Q3SY77 523 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 TRMT12Q53H54 448 aaKnown RBP13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 XKR7Q5GH72 579 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 RNFT1Q5M7Z0 435 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 BEND6Q5SZJ8 279 aaPredicted RBP13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 R3HCC1LQ7Z5L2 792 aaKnown RBP13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 FJX1Q86VR8 437 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 SPPL2CQ8IUH8 684 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 OR10G3Q8NGC4 313 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 ZFP28Q8NHY6 868 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 DIO2Q92813 273 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 PPCDCQ96CD2 204 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 MTERF3Q96E29 417 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 PSMG3-AS1Q96PY0 264 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 DOHHQ9BU89 302 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 REEP4Q9H6H4 257 aa13.08□□□□□ -0.32
SLC13A3-205ENST00000417157 RP1L1Q8IWN7 2480 aaPredicted RBP13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 A0A087WV62 115 aa13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 WDR91A4D1P6 747 aa13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 G3V3Y1 287 aa13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 PDPK1O15530 556 aa13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 CDC40O60508 579 aaKnown RBP eCLIP13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 TBX19O60806 448 aa13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 ABCB7O75027 752 aa13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 SKAP2O75563 359 aaPredicted RBP13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 PPM1BO75688 479 aa13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 GLSO94925 669 aaPredicted RBP13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 SNX4O95219 450 aa13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 JUNP05412 331 aaKnown RBP13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 ESRRAP11474 423 aaPredicted RBP13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 ABCD3P28288 659 aa13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 KRT20P35900 424 aa13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 HPCAL1P37235 193 aa13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 DNASE1L1P49184 302 aa13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 ABCE1P61221 599 aaKnown RBP13.07□□□□□ -0.32
SLC13A3-205ENST00000417157 RFTN2Q52LD8 501 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms