RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 MFSD13AQ14CX5 517 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 LARS2Q15031 903 aaKnown RBP4.25□□□□□ -1.73
PTPRK-210ENST00000415055 MED22Q15528 200 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 AP5B1Q2VPB7 878 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 HSP90AA4PQ58FG1 418 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 RNASE12Q5GAN4 147 aaKnown RBP4.25□□□□□ -1.73
PTPRK-210ENST00000415055 FNBP1LQ5T0N5 605 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 CNSTQ6PJW8 725 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 ZNF677Q86XU0 584 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 UEVLDQ8IX04 471 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 PAQR4Q8N4S7 273 aaPredicted RBP4.25□□□□□ -1.73
PTPRK-210ENST00000415055 POC5Q8NA72 575 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 DNAAF1Q8NEP3 725 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 OR11G2Q8NGC1 345 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 GSDMBQ8TAX9 411 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.25□□□□□ -1.73
PTPRK-210ENST00000415055 ASB5Q8WWX0 329 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 LINC00476Q8WZB0 136 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 HAS2Q92819 552 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 ARSGQ96EG1 525 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 RBM41Q96IZ5 413 aaKnown RBP4.25□□□□□ -1.73
PTPRK-210ENST00000415055 GPR78Q96P69 363 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 NRTNQ99748 197 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 GPATCH1Q9BRR8 931 aaKnown RBP4.25□□□□□ -1.73
PTPRK-210ENST00000415055 TUBGCP2Q9BSJ2 902 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 TDRD1Q9BXT4 1180 aaKnown RBP4.25□□□□□ -1.73
PTPRK-210ENST00000415055 XKR8Q9H6D3 395 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 KIR3DX1Q9H7L2 352 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 MRM3Q9HC36 420 aaKnown RBP4.25□□□□□ -1.73
PTPRK-210ENST00000415055 BPIFA1Q9NP55 256 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 CCDC177Q9NQR7 707 aaPredicted RBP4.25□□□□□ -1.73
PTPRK-210ENST00000415055 C20orf141Q9NUB4 165 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 ETNK2Q9NVF9 386 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 RBM22Q9NW64 420 aaKnown RBP eCLIP4.25□□□□□ -1.73
PTPRK-210ENST00000415055 GRHL1Q9NZI5 618 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 CWC15Q9P013 229 aaKnown RBP4.25□□□□□ -1.73
PTPRK-210ENST00000415055 CTSFQ9UBX1 484 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 HSPB7Q9UBY9 170 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 KCNN3Q9UGI6 736 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 ADAM18Q9Y3Q7 739 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 CCL27Q9Y4X3 112 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 HEBP2Q9Y5Z4 205 aa4.25□□□□□ -1.73
PTPRK-210ENST00000415055 EPN1Q9Y6I3 576 aaPredicted RBP4.25□□□□□ -1.73
PTPRK-210ENST00000415055 TGP01266 2768 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 USF3Q68DE3 2245 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 A0A1B0GX78 115 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 OR5H15A6NDH6 313 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 A8MUI8 341 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 C2orf74A8MZ97 194 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 ANKRD66B4E2M5 251 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 INAFM1C9JVW0 142 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 F8VZ95 297 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 H0YIZ8 118 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 BTN3A3O00478 584 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 UBE2CO00762 179 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 HCRTR1O43613 425 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 KCNJ13O60928 360 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 NDUFS3O75489 264 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 BAG2O95816 211 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 TUBB4AP04350 444 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 TPOP07202 933 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 CELA2AP08217 269 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 CHRNB2P17787 502 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 MSH3P20585 1137 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 CXCR2P25025 360 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 MCM3P25205 808 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 POU1F1P28069 291 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 MIPP30301 263 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 CHRNB4P30926 498 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 CDAP32320 146 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 SERPINB6P35237 376 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 SPAM1P38567 509 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 OR1D4P47884 311 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 CTSCP53634 463 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 RAD23AP54725 363 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 DCDC1P59894 354 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 RPL26P61254 145 aaKnown RBP4.24□□□□□ -1.73
PTPRK-210ENST00000415055 HSF1Q00613 529 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 EEF1A2Q05639 463 aaKnown RBP4.24□□□□□ -1.73
PTPRK-210ENST00000415055 GAB1Q13480 694 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 SCARB2Q14108 478 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 DPYSQ14117 519 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 KEAP1Q14145 624 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 ATP13A5Q4VNC0 1218 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 KRTCAP3Q53RY4 240 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 PCID2Q5JVF3 399 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 CCDC122Q5T0U0 273 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 PDPK2PQ6A1A2 396 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 FBXO42Q6P3S6 717 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 SPESP1Q6UW49 350 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 FAM151BQ6UXP7 276 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 Q6ZPB1 254 aaPredicted RBP4.24□□□□□ -1.73
PTPRK-210ENST00000415055 DCDC5Q6ZRR9 648 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 MDGA2Q7Z553 956 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 BCDIN3DQ7Z5W3 292 aaKnown RBP4.24□□□□□ -1.73
PTPRK-210ENST00000415055 PEG10Q86TG7 708 aaKnown RBP4.24□□□□□ -1.73
PTPRK-210ENST00000415055 NT5DC3Q86UY8 548 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 DOLPP1Q86YN1 238 aa4.24□□□□□ -1.73
PTPRK-210ENST00000415055 CCDC71Q8IV32 467 aaPredicted RBP4.24□□□□□ -1.73
PTPRK-210ENST00000415055 HSCBQ8IWL3 235 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms