RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TRIM64A6NGJ6 449 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 TGFBR3LH3BV60 316 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 GFRA3O60609 400 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 B4GALT2O60909 372 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 RNH1P13489 461 aaKnown RBP14.56□□□□□ -0.08
SHMT2-202ENST00000414700 TLX1P31314 330 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-202ENST00000414700 SLC7A2P52569 658 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 EFNA3P52797 238 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 MTPNP58546 118 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 BTG2P78543 158 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 VWA2Q5GFL6 755 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 MTX3Q5HYI7 312 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 NHSL2Q5HYW2 709 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 LRIF1Q5T3J3 769 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 ANXA8L1Q5VT79 327 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 MSANTD1Q6ZTZ1 278 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 COX15Q7KZN9 410 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 CCDC116Q8IYX3 515 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 VPS37AQ8NEZ2 397 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 OR4A15Q8NGL6 344 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 TRUB1Q8WWH5 349 aaKnown RBP14.56□□□□□ -0.08
SHMT2-202ENST00000414700 DUS3LQ96G46 650 aaKnown RBP14.56□□□□□ -0.08
SHMT2-202ENST00000414700 CGREF1Q99674 301 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 TMEM121BQ9BXQ6 578 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-202ENST00000414700 STRADBQ9C0K7 418 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 GLIPR2Q9H4G4 154 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 NANOGQ9H9S0 305 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 ZNF304Q9HCX3 659 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 SLC39A1Q9NY26 324 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 TRPC4Q9UBN4 977 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 CTSFQ9UBX1 484 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 BTNL2Q9UIR0 455 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 MAP4K5Q9Y4K4 846 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 PCDHB3Q9Y5E6 796 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 SPACA6W5XKT8 324 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 PTPRBP23467 1997 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 TEX51A0A1B0GUA7 166 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 MAPK10P53779 464 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 MANFP55145 182 aaKnown RBP14.56□□□□□ -0.08
SHMT2-202ENST00000414700 RHDQ02161 417 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 DSG2Q14126 1118 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 ARHGAP40Q5TG30 622 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 YOD1Q5VVQ6 348 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-202ENST00000414700 ZNF385CQ66K41 422 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-202ENST00000414700 LCN10Q6JVE6 187 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 TTC33Q6PID6 262 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-202ENST00000414700 ZNF621Q6ZSS3 439 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 C10orf111Q8N326 155 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 NETO1Q8TDF5 533 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 TFAP2CQ92754 450 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 ANKRD9Q96BM1 317 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-202ENST00000414700 TBC1D20Q96BZ9 403 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 LIN37Q96GY3 246 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-202ENST00000414700 AMDHD1Q96NU7 426 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 SLC29A1Q99808 456 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 CMTM6Q9NX76 183 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 ERGIC3Q9Y282 383 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 CLDN16Q9Y5I7 305 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 SDK2Q58EX2 2172 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 A0A096LPI6 279 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 A0A1W2PPW3 197 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 MYO1GB0I1T2 1018 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 TMX2-CTNND1H3BSU7 103 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 NME4O00746 187 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 CSRP1P21291 193 aaKnown RBP14.55□□□□□ -0.08
SHMT2-202ENST00000414700 MAOAP21397 527 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 FBLP22087 321 aaKnown RBP14.55□□□□□ -0.08
SHMT2-202ENST00000414700 SLC7A1P30825 629 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 XKP51811 444 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 NCBP2P52298 156 aaKnown RBP eCLIP14.55□□□□□ -0.08
SHMT2-202ENST00000414700 LTB4RQ15722 352 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 IRAK1BP1Q5VVH5 260 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 THOC7Q6I9Y2 204 aaKnown RBP14.55□□□□□ -0.08
SHMT2-202ENST00000414700 PPP4R4Q6NUP7 873 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 PRMT9Q6P2P2 845 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 ZNF786Q8N393 782 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 ANKFN1Q8N957 763 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 FAM156AQ8NDB6 213 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 OR5AK3PQ8NH89 298 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 DOK4Q8TEW6 326 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 DEPDC7Q96QD5 511 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 BBS4Q96RK4 519 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 CXorf36Q9H7Y0 433 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 ANKRA2Q9H9E1 313 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 SIRT3Q9NTG7 399 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-202ENST00000414700 TAS2R9Q9NYW1 312 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 ADA2Q9NZK5 511 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 PISDQ9UG56 409 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 ACSL6Q9UKU0 697 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 NUP210LQ5VU65 1888 aa14.55□□□□□ -0.08
SHMT2-202ENST00000414700 B4E171 279 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 ERN1O75460 977 aaKnown RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 OXSR1O95747 527 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 FHP07954 510 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 S100A1P23297 94 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 MYF6P23409 242 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 RORAP35398 523 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 TSPAN7P41732 249 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 NOVA1P51513 510 aaKnown RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 BMXP51813 675 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms