RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ARSFP54793 590 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 LGALS4P56470 323 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 NAA20P61599 178 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 ESRRGP62508 458 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 CCZ1BP86790 482 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 CCZ1P86791 482 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 SHC2P98077 582 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 MYL7Q01449 175 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 SP3Q02447 781 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 PAX5Q02548 391 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 RBBP4Q09028 425 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 MGAT2Q10469 447 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 ILKQ13418 452 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 IL18R1Q13478 541 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 MED21Q13503 144 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 KRT81Q14533 505 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF268Q14587 947 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 GRM4Q14833 912 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 TRAM2Q15035 370 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 SLC1A5Q15758 541 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 RBBP7Q16576 425 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 TMEM249Q2WGJ8 235 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 CNPY1Q3B7I2 92 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 KHDC1Q4VXA5 237 aaKnown RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 TNFAIP8L3Q5GJ75 292 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 MTX3Q5HYI7 312 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 UBAP2Q5T6F2 1119 aaKnown RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 PRAMEF18Q5VWM3 479 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 APOBEC3HQ6NTF7 200 aaKnown RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 REEP3Q6NUK4 255 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 H3F3CQ6NXT2 135 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 PODNL1Q6PEZ8 512 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 CYHR1Q6ZMK1 362 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 FAM92BQ6ZTR7 304 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 Q6ZUG5 572 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 ASB18Q6ZVZ8 466 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 USP30Q70CQ3 517 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 TSPAN33Q86UF1 283 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 NT5DC3Q86UY8 548 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 C4orf19Q8IY42 314 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 YAF2Q8IY57 180 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 PUSL1Q8N0Z8 303 aaKnown RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 AMER2Q8N7J2 671 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 TERB1Q8NA31 727 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 PDPRQ8NCN5 879 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 OR5D13Q8NGL4 314 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 OR10S1Q8NGN2 331 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 GRPEL2Q8TAA5 225 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 MAGEE2Q8TD90 523 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 IGDCC4Q8TDY8 1250 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 DNAJB3Q8WWF6 145 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 GAB3Q8WWW8 586 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 NRGNQ92686 78 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 HGDQ93099 445 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 TCEAL3Q969E4 200 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 ST6GALNAC6Q969X2 333 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 DGCR14Q96DF8 476 aaKnown RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 STAMBPL1Q96FJ0 436 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 COQ2Q96H96 371 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF333Q96JL9 665 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 CLPTM1LQ96KA5 538 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 MCCC1Q96RQ3 725 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 CRAMP1Q96RY5 1269 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 MYOCQ99972 504 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 UTP23Q9BRU9 249 aaKnown RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 TMEM79Q9BSE2 394 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 TRMOQ9BU70 441 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 SPATA5L1Q9BVQ7 753 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 ACTRT3Q9BYD9 372 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 CSTL1Q9H114 145 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 MEGF9Q9H1U4 602 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 TMEM231Q9H6L2 316 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 GBA2Q9HCG7 927 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-203ENST00000414174 MYNNQ9NPC7 610 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 IFT46Q9NQC8 304 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 NANSQ9NR45 359 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 FBXO8Q9NRD0 319 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 RRP7BPQ9NSQ0 103 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 SDHAF2Q9NX18 166 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 SLC2A8Q9NY64 477 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 RDH8Q9NYR8 311 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 PLK2Q9NYY3 685 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 RNF14Q9UBS8 474 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 IL17BQ9UHF5 180 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 OPN4Q9UHM6 478 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 PLAGL1Q9UM63 463 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 GUCA1BQ9UMX6 200 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 ICKQ9UPZ9 632 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 PPP1R3CQ9UQK1 317 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 KLK4Q9Y5K2 254 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 OR51B4Q9Y5P0 310 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 PTGDR2Q9Y5Y4 395 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 FAM135BQ49AJ0 1406 aa3.41□□□□□ -1.86
SF3B1-203ENST00000414174 TBC1D3KA0A087X1G2 549 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 A0A1B0GVM2 712 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SMIM31A0A1B0GVY4 71 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ILVBLA1L0T0 632 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 GRID2IPA4D2P6 1211 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 LOC110117498-PIK3R3F6TDL0 507 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 H3BN98 237 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms