RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 MEOX1P50221 254 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 PPIAP62937 165 aaKnown RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 RAE1P78406 368 aaKnown RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 IRX1P78414 480 aaPredicted RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 LRRC74AQ0VAA2 488 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 MRPL49Q13405 166 aaKnown RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 RPS6KA2Q15349 733 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 ZNHIT3Q15649 155 aaPredicted RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 LSM12Q3MHD2 195 aaKnown RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 UGT3A2Q3SY77 523 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 ARL13AQ5H913 290 aaPredicted RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 KANK2Q63ZY3 851 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 FAM71E1Q6IPT2 247 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 BHLHB9Q6PI77 547 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 Q6ZSR9 355 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 FAM47EQ6ZV65 393 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 ACAD11Q709F0 780 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 EXOC3L1Q86VI1 746 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 SIAH3Q8IW03 269 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 OR4N5Q8IXE1 308 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 C9orf40Q8IXQ3 194 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 PM20D2Q8IYS1 436 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 FAM109AQ8N4B1 249 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 RNF175Q8N4F7 328 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 LRRN4CLQ8ND94 238 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 PPP1R14CQ8TAE6 165 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 FAM57AQ8TBR7 257 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 ASB5Q8WWX0 329 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 PPWD1Q96BP3 646 aaKnown RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 MOAP1Q96BY2 351 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 KLHL29Q96CT2 875 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 NTNG2Q96CW9 530 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 ZBED6CLQ96FA7 236 aaPredicted RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 TMEM41AQ96HV5 264 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 FCRL1Q96LA6 429 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 FAM111AQ96PZ2 611 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 CNPPD1Q9BV87 410 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 SORBS1Q9BX66 1292 aaKnown RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 TP63Q9H3D4 680 aaPredicted RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 REEP4Q9H6H4 257 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 ZDHHC11Q9H8X9 412 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 LRTM1Q9HBL6 345 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 SH2D2AQ9NP31 389 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 ZFP64Q9NPA5 681 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 GIN1Q9NXP7 522 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 COQ3Q9NZJ6 369 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 MAT2BQ9NZL9 334 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 NTMQ9P121 344 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 LUZP4Q9P127 313 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 STOML1Q9UBI4 398 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 ERRFI1Q9UJM3 462 aaPredicted RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 HAO1Q9UJM8 370 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 GPR55Q9Y2T6 319 aaPredicted RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 CCL27Q9Y4X3 112 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 TIMM22Q9Y584 194 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 DNAJC15Q9Y5T4 150 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 EML6Q6ZMW3 1958 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 POLEQ07864 2286 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 A0A1B0GTL3 188 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 GLOD5A6NK44 160 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 SMIM23A6NLE4 172 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 WASHC1A8K0Z3 465 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 AHRRA9YTQ3 701 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 NPIPA5E9PKD4 350 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 CCL21O00585 134 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 PPM1BO75688 479 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 OR6B1O95007 311 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 NADKO95544 446 aaPredicted RBP5.89□□□□□ -1.47
USP54-202ENST00000413442 GBAP04062 536 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 SERPINE1P05121 402 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 IL3P08700 152 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 KRT16P08779 473 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 DHRS4L1P0CG22 281 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 PRPS1L1P21108 318 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 GPX3P22352 226 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 MST1P26927 711 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 FEN1P39748 380 aaKnown RBP5.89□□□□□ -1.47
USP54-202ENST00000413442 CASP3P42574 277 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 FRKP42685 505 aaPredicted RBP5.89□□□□□ -1.47
USP54-202ENST00000413442 ALDH9A1P49189 494 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 EMDP50402 254 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 RPL14P50914 215 aaKnown RBP5.89□□□□□ -1.47
USP54-202ENST00000413442 NR0B1P51843 470 aaKnown RBP5.89□□□□□ -1.47
USP54-202ENST00000413442 C21orf58P58505 322 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 TXNL4AP83876 142 aaKnown RBP5.89□□□□□ -1.47
USP54-202ENST00000413442 HMGCS1Q01581 520 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 PLGLB1Q02325 96 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 EMX2Q04743 252 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 SRSF1Q07955 248 aaKnown RBP eCLIP5.89□□□□□ -1.47
USP54-202ENST00000413442 ZNF844Q08AG5 666 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 MGAT2Q10469 447 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 PDE7AQ13946 482 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 DPY19L1Q2PZI1 675 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 GLYR1Q49A26 553 aaPredicted RBP5.89□□□□□ -1.47
USP54-202ENST00000413442 ATP6AP1LQ52LC2 224 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 PRR30Q53SZ7 412 aaPredicted RBP5.89□□□□□ -1.47
USP54-202ENST00000413442 ZNF628Q5EBL2 1059 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 CEP85LQ5SZL2 805 aa5.89□□□□□ -1.47
USP54-202ENST00000413442 WLSQ5T9L3 541 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms