RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 RPL22P35268 128 aaKnown RBP5.68□□□□□ -1.5
LINC00396-201ENST00000411690 CASP3P42574 277 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 LHX2P50458 406 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 CLDN18P56856 261 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 FBXW4P57775 412 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 RPP38P78345 283 aaKnown RBP5.68□□□□□ -1.5
LINC00396-201ENST00000411690 GPS1Q13098 491 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 SERTAD2Q14140 314 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 RCN2Q14257 317 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 FGFBP1Q14512 234 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 RPS6KA2Q15349 733 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 TTLL9Q3SXZ7 439 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 TOR1AIP1Q5JTV8 583 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 AGAP6Q5VW22 663 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 AAGABQ6PD74 315 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 AGTRAPQ6RW13 159 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 STAC2Q6ZMT1 411 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 BBS12Q6ZW61 710 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 UBE2R2Q712K3 238 aaPredicted RBP5.68□□□□□ -1.5
LINC00396-201ENST00000411690 SLC29A4Q7RTT9 530 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 IFNEQ86WN2 208 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 RCOR2Q8IZ40 523 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 TAGAPQ8N103 731 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 MPP5Q8N3R9 675 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 OTUD6BQ8N6M0 293 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 GPATCH11Q8N954 259 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 SNX31Q8N9S9 440 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 OR14L1PQ8NHC6 308 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 RDH11Q8TC12 318 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 ACTL9Q8TC94 416 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 PEX13Q92968 403 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 C3orf49Q96BT1 292 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 RHBDF1Q96CC6 855 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 TMEM41AQ96HV5 264 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 GAL3ST4Q96RP7 486 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 HAUS8Q9BT25 410 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 CACNG6Q9BXT2 260 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 ACTR6Q9GZN1 396 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 NGBQ9NPG2 151 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 FANCFQ9NPI8 374 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 TMEFF2Q9UIK5 374 aaPredicted RBP5.68□□□□□ -1.5
LINC00396-201ENST00000411690 CRYL1Q9Y2S2 319 aa5.68□□□□□ -1.5
LINC00396-201ENST00000411690 EPN1Q9Y6I3 576 aaPredicted RBP5.68□□□□□ -1.5
LINC00396-201ENST00000411690 A0A088AWK7 358 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 IQANK1A0A1B0GTG1 560 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 SYCE3A1L190 88 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 CTAGE15A4D2H0 777 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 SMTNL1A8MU46 457 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 CDC7O00311 574 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 PFDN6O15212 129 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 PSTPIP1O43586 416 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 CDH16O75309 829 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 ESR1P03372 595 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 IGKV3-11P04433 115 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 SERPINA6P08185 405 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 CSF3P09919 207 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 MPC1LP0DKB6 136 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 COX7A2P14406 83 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 ZNF708P17019 499 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 ZNF10P21506 573 aaPredicted RBP5.67□□□□□ -1.5
LINC00396-201ENST00000411690 COMTP21964 271 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 LIM2P55344 173 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 GFRA1P56159 465 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 STXBP1P61764 594 aaKnown RBP5.67□□□□□ -1.5
LINC00396-201ENST00000411690 ID2Q02363 134 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 CUL1Q13616 776 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 CSHL1Q14406 222 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 RBBP5Q15291 538 aaKnown RBP5.67□□□□□ -1.5
LINC00396-201ENST00000411690 SWI5Q1ZZU3 235 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 ANGPTL8Q6UXH0 198 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 TMEM64Q6YI46 380 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 PPP1R21Q6ZMI0 780 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 CYHR1Q6ZMK1 362 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 SDCCAG8Q86SQ7 713 aaPredicted RBP5.67□□□□□ -1.5
LINC00396-201ENST00000411690 PEG10Q86TG7 708 aaKnown RBP5.67□□□□□ -1.5
LINC00396-201ENST00000411690 CTAGE6Q86UF2 777 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 ANKRD53Q8N9V6 530 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 KBTBD8Q8NFY9 601 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 ZNF418Q8TF45 676 aaPredicted RBP5.67□□□□□ -1.5
LINC00396-201ENST00000411690 FIG4Q92562 907 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 GAL3ST3Q96A11 431 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 SNF8Q96H20 258 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 CALR3Q96L12 384 aaKnown RBP5.67□□□□□ -1.5
LINC00396-201ENST00000411690 CSF3RQ99062 836 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 FAM118BQ9BPY3 351 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 RBM4Q9BWF3 364 aaKnown RBP5.67□□□□□ -1.5
LINC00396-201ENST00000411690 TRIM2Q9C040 744 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 OR10A4Q9H209 315 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 SPNS1Q9H2V7 528 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 METTL17Q9H7H0 456 aaPredicted RBP5.67□□□□□ -1.5
LINC00396-201ENST00000411690 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.67□□□□□ -1.5
LINC00396-201ENST00000411690 PLSCR4Q9NRQ2 329 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.67□□□□□ -1.5
LINC00396-201ENST00000411690 GPR52Q9Y2T5 361 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 WBP11Q9Y2W2 641 aaKnown RBP5.67□□□□□ -1.5
LINC00396-201ENST00000411690 TCAF1Q9Y4C2 921 aa5.67□□□□□ -1.5
LINC00396-201ENST00000411690 VWC2LB2RUY7 222 aa5.66□□□□□ -1.5
LINC00396-201ENST00000411690 EREGO14944 169 aa5.66□□□□□ -1.5
LINC00396-201ENST00000411690 ERI3O43414 337 aaKnown RBP5.66□□□□□ -1.5
LINC00396-201ENST00000411690 ZNF189O75820 626 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms