RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 EMBQ6PCB8 327 aa17.52■□□□□ 0.4
SF3A1-202ENST00000411423 CCDC116Q8IYX3 515 aa17.52■□□□□ 0.4
SF3A1-202ENST00000411423 LRRC25Q8N386 305 aaPredicted RBP17.52■□□□□ 0.4
SF3A1-202ENST00000411423 RIBC1Q8N443 379 aaPredicted RBP17.52■□□□□ 0.4
SF3A1-202ENST00000411423 ZNF808Q8N4W9 903 aaPredicted RBP17.52■□□□□ 0.4
SF3A1-202ENST00000411423 OR52R1Q8NGF1 315 aa17.52■□□□□ 0.4
SF3A1-202ENST00000411423 OR2T11Q8NH01 316 aa17.52■□□□□ 0.4
SF3A1-202ENST00000411423 NTNG2Q96CW9 530 aa17.52■□□□□ 0.4
SF3A1-202ENST00000411423 FAM111AQ96PZ2 611 aa17.52■□□□□ 0.4
SF3A1-202ENST00000411423 PARD6BQ9BYG5 372 aa17.52■□□□□ 0.4
SF3A1-202ENST00000411423 BCAP29Q9UHQ4 241 aa17.52■□□□□ 0.4
SF3A1-202ENST00000411423 NPFFR2Q9Y5X5 522 aa17.52■□□□□ 0.4
SF3A1-202ENST00000411423 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.52■□□□□ 0.4
SF3A1-202ENST00000411423 IGHG3P01860 377 aa17.51■□□□□ 0.39
SF3A1-202ENST00000411423 TPOP07202 933 aa17.51■□□□□ 0.39
SF3A1-202ENST00000411423 ANXA4P09525 319 aaPredicted RBP17.51■□□□□ 0.39
SF3A1-202ENST00000411423 ESRRAP11474 423 aaPredicted RBP17.51■□□□□ 0.39
SF3A1-202ENST00000411423 DRD2P14416 443 aa17.51■□□□□ 0.39
SF3A1-202ENST00000411423 ENDOUP21128 410 aaKnown RBP17.51■□□□□ 0.39
SF3A1-202ENST00000411423 EMDP50402 254 aa17.51■□□□□ 0.39
SF3A1-202ENST00000411423 CEBPEQ15744 281 aa17.51■□□□□ 0.39
SF3A1-202ENST00000411423 SPDYAQ5MJ70 313 aa17.51■□□□□ 0.39
SF3A1-202ENST00000411423 FAM71E1Q6IPT2 247 aa17.51■□□□□ 0.39
SF3A1-202ENST00000411423 SLC22A16Q86VW1 577 aa17.51■□□□□ 0.39
SF3A1-202ENST00000411423 FAM109AQ8N4B1 249 aa17.51■□□□□ 0.39
SF3A1-202ENST00000411423 OR9A2Q8NGT5 310 aa17.51■□□□□ 0.39
SF3A1-202ENST00000411423 KAT2AQ92830 837 aa17.51■□□□□ 0.39
SF3A1-202ENST00000411423 ZNF703Q9H7S9 590 aaPredicted RBP17.51■□□□□ 0.39
SF3A1-202ENST00000411423 ZNF780BQ9Y6R6 833 aa17.51■□□□□ 0.39
SF3A1-202ENST00000411423 ZNF407Q9C0G0 2248 aa17.51■□□□□ 0.39
SF3A1-202ENST00000411423 ATP6AP2A0A1C7CYW4 349 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 CCDC151A5D8V7 595 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 TMEM233B4DJY2 109 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 PRSS44E7EML9 344 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 ACOT7O00154 380 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 PRRG2O14669 202 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 TRIM13O60858 407 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 ATP6AP2O75787 350 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 UROSP10746 265 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 TACR1P25103 407 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 ABCD3P28288 659 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 IMPG1Q17R60 797 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 FNDC7Q5VTL7 733 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 SP5Q6BEB4 398 aaPredicted RBP17.5■□□□□ 0.39
SF3A1-202ENST00000411423 RPTNQ6XPR3 784 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 Q6ZSR9 355 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 ZCCHC23Q6ZST2 131 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 TRILQ7L0X0 811 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 TAGAPQ8N103 731 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 SPPL2AQ8TCT8 520 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 ZNF675Q8TD23 568 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 TCP10LQ8TDR4 215 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 ZBTB9Q96C00 473 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 EGLN2Q96KS0 407 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 ROPN1BQ9BZX4 212 aaPredicted RBP17.5■□□□□ 0.39
SF3A1-202ENST00000411423 ROPN1Q9HAT0 212 aaPredicted RBP17.5■□□□□ 0.39
SF3A1-202ENST00000411423 SLC35C2Q9NQQ7 365 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 PNPLA3Q9NST1 481 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 PSME2Q9UL46 239 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 FIS1Q9Y3D6 152 aa17.5■□□□□ 0.39
SF3A1-202ENST00000411423 A0A1B0GVC2 190 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 NPIPA2E9PIF3 369 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 E9PLN8 166 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 NPIPA3F8WFD2 350 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 C19orf84I3L1E1 186 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 AZIN1O14977 448 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 TRIM3O75382 744 aaPredicted RBP17.49■□□□□ 0.39
SF3A1-202ENST00000411423 RSL1D1O76021 490 aaKnown RBP17.49■□□□□ 0.39
SF3A1-202ENST00000411423 NAA20P61599 178 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 KCNJ2P63252 427 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 IFFO1Q0D2I5 559 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 ZNF763Q0D2J5 394 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 C2orf80Q0P641 193 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 ART3Q13508 389 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 RPS6KA2Q15349 733 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 C6orf163Q5TEZ5 329 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 CES4AQ5XG92 561 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 HLA-DQA1Q5Y7H0 255 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 KANK2Q63ZY3 851 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 NOXRED1Q6NXP6 359 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 ARHGAP11AQ6P4F7 1023 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 RGS9BPQ6ZS82 235 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 DND1Q8IYX4 353 aaKnown RBP17.49■□□□□ 0.39
SF3A1-202ENST00000411423 MREGQ8N565 214 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 C17orf47Q8NEP4 570 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 CDC26Q8NHZ8 85 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 HGDQ93099 445 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 VKORC1Q9BQB6 163 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 ZFP64Q9NPA5 681 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 PFDN4Q9NQP4 134 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 CNIH4Q9P003 139 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 SPRR3Q9UBC9 169 aa17.49■□□□□ 0.39
SF3A1-202ENST00000411423 ESPNB1AK53 854 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 H3BQF6 201 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 TYROBPO43914 113 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 CRCPO75575 148 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 ABCB1P08183 1280 aaPredicted RBP17.48■□□□□ 0.39
SF3A1-202ENST00000411423 PRF1P14222 555 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 DDCP20711 480 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 PRPH2P23942 346 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms