RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 CHAF1BQ13112 559 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 AIMP2Q13155 320 aaKnown RBP14.15□□□□□ -0.14
LSM5-207ENST00000410044 DUSP8Q13202 625 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 MYBPC3Q14896 1274 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 BTBD16Q32M84 506 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 EXOSC6Q5RKV6 272 aaKnown RBP14.15□□□□□ -0.14
LSM5-207ENST00000410044 ATP1A1-AS1Q5TC04 95 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 JMJD6Q6NYC1 403 aaPredicted RBP14.15□□□□□ -0.14
LSM5-207ENST00000410044 ZCCHC12Q6PEW1 402 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 TMEM107Q6UX40 140 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 APLFQ8IW19 511 aaPredicted RBP14.15□□□□□ -0.14
LSM5-207ENST00000410044 TRIML2Q8N7C3 387 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 ZNF321PQ8N8H1 164 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 DOK4Q8TEW6 326 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 NCLNQ969V3 563 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 GIMAP5Q96F15 307 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 DCBLD2Q96PD2 775 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 CNPPD1Q9BV87 410 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 OR8D2Q9GZM6 311 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 ZNF160Q9HCG1 818 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 ARL8BQ9NVJ2 186 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 WDR70Q9NW82 654 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 TAGLN3Q9UI15 199 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 CFL2Q9Y281 166 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 PCDHB14Q9Y5E9 798 aa14.15□□□□□ -0.14
LSM5-207ENST00000410044 FREM2Q5SZK8 3169 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 TTC36A6NLP5 189 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 CCT8L1PA6NM43 557 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 PRAMEF2O60811 474 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 COQ9O75208 318 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 ABCB1P08183 1280 aaPredicted RBP14.14□□□□□ -0.15
LSM5-207ENST00000410044 ITPKBP27987 946 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 MAP3K8P41279 467 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 TMPRSS3P57727 454 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 VAC14Q08AM6 782 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 EXOSC7Q15024 291 aaKnown RBP14.14□□□□□ -0.15
LSM5-207ENST00000410044 REP15Q6BDI9 236 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 BHLHB9Q6PI77 547 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 HACD2Q6Y1H2 254 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 RNF111Q6ZNA4 994 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 ZNF621Q6ZSS3 439 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 KBTBD2Q8IY47 623 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 POU5F2Q8N7G0 328 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 PCYOX1LQ8NBM8 494 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 SIMC1Q8NDZ2 872 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 C17orf47Q8NEP4 570 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 NUP43Q8NFH3 380 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 OR52R1Q8NGF1 315 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 OR56A1Q8NGH5 318 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 C16orf52Q8NHV5 167 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 ZFP90Q8TF47 636 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 NSL1Q96IY1 281 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 EFCAB1Q9HAE3 211 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 SLC6A13Q9NSD5 602 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 DDX18Q9NVP1 670 aaKnown RBP14.14□□□□□ -0.15
LSM5-207ENST00000410044 SLC25A37Q9NYZ2 338 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.14□□□□□ -0.15
LSM5-207ENST00000410044 SLAMF8Q9P0V8 285 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 COPS7AQ9UBW8 275 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 PRODH2Q9UF12 536 aa14.14□□□□□ -0.15
LSM5-207ENST00000410044 MRASO14807 208 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 ZFAND5O76080 213 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 SOX30O94993 753 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 ANP32DO95626 131 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 T-ENOLP0DO92 83 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 PRKAR1AP10644 381 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 MAGEA8P43361 318 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 RNF4P78317 190 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 MMEL1Q495T6 779 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 RUNDC3AQ59EK9 446 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 C6orf10Q5SRN2 563 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 SAXO2Q658L1 398 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 HSDL2Q6YN16 418 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 C6orf120Q7Z4R8 191 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 MSRB3Q8IXL7 192 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 AMER2Q8N7J2 671 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 NUBPLQ8TB37 319 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 MIPOL1Q8TD10 442 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 PSMF1Q92530 271 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 ADIPOR1Q96A54 375 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 TP53INP1Q96A56 240 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 ROPN1LQ96C74 230 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 LRRC58Q96CX6 371 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 NEURL3Q96EH8 262 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 NPAS2Q99743 824 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 SLC35A5Q9BS91 424 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 ANKRA2Q9H9E1 313 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 ZCCHC3Q9NUD5 404 aaKnown RBP14.13□□□□□ -0.15
LSM5-207ENST00000410044 GPATCH2Q9NW75 528 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 GID8Q9NWU2 228 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 GIN1Q9NXP7 522 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 VAPAQ9P0L0 249 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 BCAP29Q9UHQ4 241 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 HEMK1Q9Y5R4 338 aaPredicted RBP14.13□□□□□ -0.15
LSM5-207ENST00000410044 SNX8Q9Y5X2 465 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 KCNMB2Q9Y691 235 aa14.13□□□□□ -0.15
LSM5-207ENST00000410044 TMEM200CA6NKL6 621 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 MASP2O00187 686 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 KRT75O95678 551 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 GSNP06396 782 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms