RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 USH1CQ9Y6N9 552 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 EML6Q6ZMW3 1958 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 GOLGA8QA0A0J9YX86 632 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 C2orf92A0A1B0GVN3 265 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 GOLGA8OA6NCC3 632 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 TTLL8A6PVC2 850 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 GOLGA8NF8WBI6 632 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 PLOD2O00469 737 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 LAMP1P11279 417 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 PRPS1L1P21108 318 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 HPCAL1P37235 193 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 INPP5JQ15735 1006 aaPredicted RBP20.68■□□□□ 0.9
PTCD3-203ENST00000409783 ZNF766Q5HY98 468 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 ZNF551Q7Z340 670 aaPredicted RBP20.68■□□□□ 0.9
PTCD3-203ENST00000409783 TMEM156Q8N614 296 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 TP53INP1Q96A56 240 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 COQ8BQ96D53 544 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 SNRNP40Q96DI7 357 aaKnown RBP20.68■□□□□ 0.9
PTCD3-203ENST00000409783 BCAP29Q9UHQ4 241 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 EXPH5Q8NEV8 1989 aa20.68■□□□□ 0.9
PTCD3-203ENST00000409783 A0A087WV62 115 aa20.67■□□□□ 0.9
PTCD3-203ENST00000409783 SLITRK5O94991 958 aa20.67■□□□□ 0.9
PTCD3-203ENST00000409783 RPL3P39023 403 aaKnown RBP20.67■□□□□ 0.9
PTCD3-203ENST00000409783 MC3RP41968 323 aa20.67■□□□□ 0.9
PTCD3-203ENST00000409783 CISD2Q8N5K1 135 aaKnown RBP20.67■□□□□ 0.9
PTCD3-203ENST00000409783 SLC15A4Q8N697 577 aa20.67■□□□□ 0.9
PTCD3-203ENST00000409783 C17orf47Q8NEP4 570 aa20.67■□□□□ 0.9
PTCD3-203ENST00000409783 ACTRT2Q8TDY3 377 aa20.67■□□□□ 0.9
PTCD3-203ENST00000409783 ASB15Q8WXK1 588 aa20.67■□□□□ 0.9
PTCD3-203ENST00000409783 OR52B2Q96RD2 323 aa20.67■□□□□ 0.9
PTCD3-203ENST00000409783 TAAR6Q96RI8 345 aa20.67■□□□□ 0.9
PTCD3-203ENST00000409783 BARD1Q99728 777 aaKnown RBP20.67■□□□□ 0.9
PTCD3-203ENST00000409783 ACSS1Q9NUB1 689 aaPredicted RBP20.67■□□□□ 0.9
PTCD3-203ENST00000409783 NME6O75414 186 aaPredicted RBP20.66■□□□□ 0.9
PTCD3-203ENST00000409783 SLC25A12O75746 678 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 BCAS2O75934 225 aaPredicted RBP20.66■□□□□ 0.9
PTCD3-203ENST00000409783 PSMG1O95456 288 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 SP1P08047 785 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 IFI6P09912 130 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 PLA2G2AP14555 144 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 ZNF791Q3KP31 576 aaPredicted RBP20.66■□□□□ 0.9
PTCD3-203ENST00000409783 HSP90B2PQ58FF3 399 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 SLC25A25Q6KCM7 469 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 EPGNQ6UW88 154 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 TMEM107Q6UX40 140 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 IL20RBQ6UXL0 311 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 FAM47EQ6ZV65 393 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 MDGA2Q7Z553 956 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 CAMKMTQ7Z624 323 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 GPALPP1Q8IXQ4 340 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 CYP4Z2PQ8N1L4 340 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 HORMAD2Q8N7B1 307 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 CPT1CQ8TCG5 803 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 ELP4Q96EB1 424 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 ITPAQ9BY32 194 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 NXF5Q9H1B4 397 aaKnown RBP20.66■□□□□ 0.9
PTCD3-203ENST00000409783 AIG1Q9NVV5 245 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 MAP10Q9P2G4 905 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 C19orf53Q9UNZ5 99 aaPredicted RBP20.66■□□□□ 0.9
PTCD3-203ENST00000409783 CFL2Q9Y281 166 aa20.66■□□□□ 0.9
PTCD3-203ENST00000409783 NUP214P35658 2090 aaPredicted RBP20.66■□□□□ 0.9
PTCD3-203ENST00000409783 PRRC2CQ9Y520 2896 aaKnown RBP20.66■□□□□ 0.9
PTCD3-203ENST00000409783 A8MVJ9 347 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 UPK1AO00322 258 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 NME2P1O60361 137 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 CD46P15529 392 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 EFNA1P20827 205 aaPredicted RBP20.65■□□□□ 0.9
PTCD3-203ENST00000409783 NME2P22392 152 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 NR0B1P51843 470 aaKnown RBP20.65■□□□□ 0.9
PTCD3-203ENST00000409783 MLC1Q15049 377 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 CPTPQ5TA50 214 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 OPN5Q6U736 354 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 SPATA19Q7Z5L4 167 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 OR2L13Q8N349 312 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 SLC22A8Q8TCC7 542 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 MIB2Q96AX9 1013 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 ZBED6CLQ96FA7 236 aaPredicted RBP20.65■□□□□ 0.9
PTCD3-203ENST00000409783 VSTM2LQ96N03 204 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 KLHL1Q9NR64 748 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 RYDENQ9NUL5 291 aaKnown RBP20.65■□□□□ 0.9
PTCD3-203ENST00000409783 HPF1Q9NWY4 346 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 PRODH2Q9UF12 536 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 GPR45Q9Y5Y3 372 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 NBASA2RRP1 2371 aa20.65■□□□□ 0.9
PTCD3-203ENST00000409783 FBXO45P0C2W1 286 aa20.64■□□□□ 0.89
PTCD3-203ENST00000409783 PPICP45877 212 aa20.64■□□□□ 0.89
PTCD3-203ENST00000409783 CDK9P50750 372 aaKnown RBP20.64■□□□□ 0.89
PTCD3-203ENST00000409783 HSPB3Q12988 150 aa20.64■□□□□ 0.89
PTCD3-203ENST00000409783 INAQ16352 499 aa20.64■□□□□ 0.89
PTCD3-203ENST00000409783 HLA-DQA1Q5Y7H0 255 aa20.64■□□□□ 0.89
PTCD3-203ENST00000409783 TMEM64Q6YI46 380 aa20.64■□□□□ 0.89
PTCD3-203ENST00000409783 GALNTL5Q7Z4T8 443 aa20.64■□□□□ 0.89
PTCD3-203ENST00000409783 ARFGAP2Q8N6H7 521 aa20.64■□□□□ 0.89
PTCD3-203ENST00000409783 C5orf34Q96MH7 638 aa20.64■□□□□ 0.89
PTCD3-203ENST00000409783 TRIM4Q9C037 500 aa20.64■□□□□ 0.89
PTCD3-203ENST00000409783 SH2D2AQ9NP31 389 aa20.64■□□□□ 0.89
PTCD3-203ENST00000409783 SIRT3Q9NTG7 399 aaPredicted RBP20.64■□□□□ 0.89
PTCD3-203ENST00000409783 ASF1BQ9NVP2 202 aa20.64■□□□□ 0.89
PTCD3-203ENST00000409783 NTMQ9P121 344 aa20.64■□□□□ 0.89
PTCD3-203ENST00000409783 MAPRE3Q9UPY8 281 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms