RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 CTSBP07858 339 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 IFI6P09912 130 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 NR2F1P10589 423 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 PRKACGP22612 351 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 MLLT3P42568 568 aaPredicted RBP13.21□□□□□ -0.29
LIMS2-206ENST00000409754 GPR3P46089 330 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 PPM1FP49593 454 aaPredicted RBP13.21□□□□□ -0.29
LIMS2-206ENST00000409754 LIMK1P53667 647 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 CRISP3P54108 245 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 SHC2P98077 582 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 KCNC4Q03721 635 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 SYPL1Q16563 259 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 GARNL3Q5VVW2 1013 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 TTC23Q5W5X9 447 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 DBX2Q6ZNG2 339 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 OR4N5Q8IXE1 308 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 SMYD1Q8NB12 490 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 NCSTNQ92542 709 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 KAT2AQ92830 837 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 GIMAP5Q96F15 307 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 TREX2Q9BQ50 279 aaPredicted RBP13.21□□□□□ -0.29
LIMS2-206ENST00000409754 PDE7BQ9NP56 450 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 PTGFRNQ9P2B2 879 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 ORC6Q9Y5N6 252 aa13.21□□□□□ -0.29
LIMS2-206ENST00000409754 GPC6Q9Y625 555 aaPredicted RBP13.21□□□□□ -0.29
LIMS2-206ENST00000409754 COL5A1P20908 1838 aaPredicted RBP13.21□□□□□ -0.29
LIMS2-206ENST00000409754 IGHV1OR21-1A0A087WYE8 117 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 IGHV5-51A0A0C4DH38 117 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 PRAMEF25A6NGN4 478 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 PCNX2A6NKB5 2137 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 SPTBN2O15020 2390 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 RDH16O75452 317 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 DNAJB5O75953 348 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 SLITRK5O94991 958 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 H6PDO95479 791 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 ZBTB11O95625 1053 aaPredicted RBP13.21□□□□□ -0.3
LIMS2-206ENST00000409754 CER1O95813 267 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 ATP1B1P05026 303 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 ZNF883P0CG24 379 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 SMIM18P0DKX4 95 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 GLB1P16278 677 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 TNFRSF1BP20333 461 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 ALDH4A1P30038 563 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 RRM2P31350 389 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 MAN2A2P49641 1150 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 RAD23AP54725 363 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 FAM53BQ14153 422 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 NR1D2Q14995 579 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 DUSP7Q16829 419 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 INAVAQ3KP66 663 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 ZIK1Q3SY52 487 aaPredicted RBP13.21□□□□□ -0.3
LIMS2-206ENST00000409754 TCTE1Q5JU00 501 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 KRT73Q86Y46 540 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 SLC35F3Q8IY50 421 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 OR2L13Q8N349 312 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 TTC29Q8NA56 475 aaPredicted RBP13.21□□□□□ -0.3
LIMS2-206ENST00000409754 TMEM52Q8NDY8 209 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 OR7G2Q8NG99 324 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 OR9A4Q8NGU2 314 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 APOBEC4Q8WW27 367 aaKnown RBP13.21□□□□□ -0.3
LIMS2-206ENST00000409754 C16orf58Q96GQ5 468 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 AHCYL2Q96HN2 611 aaKnown RBP13.21□□□□□ -0.3
LIMS2-206ENST00000409754 MS4A4EQ96PG1 132 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 OR7D2Q96RA2 312 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 MBOAT4Q96T53 435 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 BARD1Q99728 777 aaKnown RBP13.21□□□□□ -0.3
LIMS2-206ENST00000409754 ACTRT3Q9BYD9 372 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 SOX17Q9H6I2 414 aaPredicted RBP13.21□□□□□ -0.3
LIMS2-206ENST00000409754 CLK4Q9HAZ1 481 aaKnown RBP13.21□□□□□ -0.3
LIMS2-206ENST00000409754 EXD2Q9NVH0 621 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 DDX18Q9NVP1 670 aaKnown RBP13.21□□□□□ -0.3
LIMS2-206ENST00000409754 SOHLH2Q9NX45 425 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 PDP1Q9P0J1 537 aaPredicted RBP13.21□□□□□ -0.3
LIMS2-206ENST00000409754 TMEFF2Q9UIK5 374 aaPredicted RBP13.21□□□□□ -0.3
LIMS2-206ENST00000409754 CLCA2Q9UQC9 943 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 MYRFQ9Y2G1 1151 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 ENPP4Q9Y6X5 453 aa13.21□□□□□ -0.3
LIMS2-206ENST00000409754 A0A0G2JPF8 293 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 FITM1A5D6W6 292 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 HNRNPCL2B2RXH8 293 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 HNRNPCL3B7ZW38 293 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 H3BNH8 94 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 CHST10O43529 356 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 FGF17O60258 216 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 PCDHGA12O60330 932 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 RECKO95980 971 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 IFNW1P05000 195 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 HNRNPCL4P0DMR1 293 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 ETS2P15036 469 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 IGFBP5P24593 272 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 XCR1P46094 333 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 OR1E2P47887 323 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 KCNJ5P48544 419 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 OR1D5P58170 312 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 GPLD1P80108 840 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 FUT5Q11128 374 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 ZNF628Q5EBL2 1059 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 NKAIN2Q5VXU1 208 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 ANKRD34AQ69YU3 496 aa13.2□□□□□ -0.3
LIMS2-206ENST00000409754 KDM4DQ6B0I6 523 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms