RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 DOHHQ9BU89 302 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 ANGPTL4Q9BY76 406 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 EPB41L4BQ9H329 900 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 TBK1Q9UHD2 729 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 MID2Q9UJV3 735 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 ACAD8Q9UKU7 415 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 NCOA6Q14686 2063 aaPredicted RBP13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 ATP6AP2A0A1C7CYW4 349 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 GNG14A0A1W2PPG7 69 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 FOXO6A8MYZ6 492 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 GOLGA8RI6L899 631 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 TRIM3O75382 744 aaPredicted RBP13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 ATP6AP2O75787 350 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 SLITRK5O94991 958 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 TSPAN8P19075 237 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 PPICP45877 212 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 MGAT2Q10469 447 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 EMC4Q5J8M3 183 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 CFAP157Q5JU67 520 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 ZYG11AQ6WRX3 759 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 TRIM46Q7Z4K8 759 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 GDF7Q7Z4P5 450 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 OR10G3Q8NGC4 313 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 SPPL2AQ8TCT8 520 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 ZNF675Q8TD23 568 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 UBLCP1Q8WVY7 318 aaPredicted RBP13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 DIO2Q92813 273 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 KLHL29Q96CT2 875 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 C11orf24Q96F05 449 aaPredicted RBP13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 LCORQ96JN0 433 aaPredicted RBP13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 ZNF681Q96N22 645 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 BRINP2Q9C0B6 783 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 ENKD1Q9H0I2 346 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 STMN4Q9H169 189 aaPredicted RBP13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 KCNJ16Q9NPI9 418 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 GIMAP4Q9NUV9 329 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 UTS2RQ9UKP6 389 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 CNOT11Q9UKZ1 510 aaKnown RBP13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 DLGAP4Q9Y2H0 992 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 HRH3Q9Y5N1 445 aa13.36□□□□□ -0.27
NIF3L1-205ENST00000409588 AHRRA9YTQ3 701 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 G3V2L1 256 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 G3V3Y1 287 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 PCDH7O60245 1069 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 CT62P0C5K7 136 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 GPX3P22352 226 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 ELAVL4P26378 380 aaKnown RBP13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 GRNP28799 593 aaKnown RBP13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 SSTR2P30874 369 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 FEN1P39748 380 aaKnown RBP13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 PMPCAQ10713 525 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 CEBPEQ15744 281 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 SLC30A6Q6NXT4 461 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 B3GNT6Q6ZMB0 384 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 C3P1Q6ZMU1 363 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 LIX1Q8N485 282 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 CCNYL1Q8N7R7 359 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 ACBD4Q8NC06 268 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 OR5M3Q8NGP4 307 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 NEIL3Q8TAT5 605 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 CNRIP1Q96F85 164 aaPredicted RBP13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 ZNF597Q96LX8 424 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 GSTO2Q9H4Y5 243 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 EXO5Q9H790 373 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 ZNF703Q9H7S9 590 aaPredicted RBP13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 PROK2Q9HC23 129 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 MID1IP1Q9NPA3 183 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 RRAGDQ9NQL2 400 aaPredicted RBP13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 OXSMQ9NWU1 459 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 TAS2R7Q9NYW3 318 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 MAT2BQ9NZL9 334 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 BCAP29Q9UHQ4 241 aa13.35□□□□□ -0.27
NIF3L1-205ENST00000409588 PCNX1Q96RV3 2341 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 A0A0G2JMM0 328 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 A0A1W2PPB8 328 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 A0A1W2PPM1 405 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 A0A1W2PRS3 328 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 KIR3DP1A8MWS1 328 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 COPEO14579 308 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 TO15178 435 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 PLIN3O60664 434 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 PPM1BO75688 479 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 PROCP04070 461 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 ABCB1P08183 1280 aaPredicted RBP13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 UROSP10746 265 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 CPA3P15088 417 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 CAPN3P20807 821 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 ABCD3P28288 659 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 TIA1P31483 386 aaKnown RBP eCLIP13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 CASP3P42574 277 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 ALDH9A1P49189 494 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 NAGLUP54802 743 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 RIBC1Q8N443 379 aaPredicted RBP13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 SREK1Q8WXA9 508 aaKnown RBP13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 NTNG2Q96CW9 530 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 C14orf79Q96F83 325 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 TMEM41AQ96HV5 264 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 TTYH2Q9BSA4 534 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 TRMOQ9BU70 441 aa13.34□□□□□ -0.27
NIF3L1-205ENST00000409588 ACPTQ9BZG2 426 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms