RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PGDP52209 483 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 PRR5P85299 388 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 EEF1A2Q05639 463 aaKnown RBP15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 ZNF267Q14586 743 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 LTB4RQ15722 352 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 SPDYE7PQ495Y7 208 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 PAGE3Q5JUK9 113 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 REP15Q6BDI9 236 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 KIRREL2Q6UWL6 708 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 TMEM107Q6UX40 140 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 NDUFAF7Q7L592 441 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 PPP1R32Q7Z5V6 425 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 MRGPREQ86SM8 312 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 OR7G1Q8NGA0 311 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 OR11G2Q8NGC1 345 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 SFXN5Q8TD22 340 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 CTHRC1Q96CG8 243 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 ELP4Q96EB1 424 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 FBXL20Q96IG2 436 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 NSL1Q96IY1 281 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 CNPPD1Q9BV87 410 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 ARL8BQ9NVJ2 186 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 DDX18Q9NVP1 670 aaKnown RBP15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 COPS7AQ9UBW8 275 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 SNX8Q9Y5X2 465 aa15.39■□□□□ 0.05
TSPAN4-208ENST00000409531 COL6A6A6NMZ7 2263 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 NSG1A0A0A6YYJ2 146 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 EBAG9O00559 213 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 EMC8O43402 210 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 SEC24DO94855 1032 aaPredicted RBP15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 HPP00738 406 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 COX6A1P12074 109 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 ICAM2P13598 275 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 CALB2P22676 271 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 UQCRC2P22695 453 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 SOAT1P35610 550 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 MC3RP41968 323 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 CDK9P50750 372 aaKnown RBP15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 CCL11P51671 97 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 RRADP55042 308 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 AP2B1P63010 937 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 FUT7Q11130 342 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 ART3Q13508 389 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 ATP1A4Q13733 1029 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 NFYCQ13952 458 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 PCOLCEQ15113 449 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 EXT1Q16394 746 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 TRMT5Q32P41 509 aaKnown RBP15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 LRIF1Q5T3J3 769 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 DGAT2L6Q6ZPD8 337 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 ZNF621Q6ZSS3 439 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 DHDDSQ86SQ9 333 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 OR2L13Q8N349 312 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 B3GNT7Q8NFL0 401 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 OR56A1Q8NGH5 318 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 KAT2AQ92830 837 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 ROPN1LQ96C74 230 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 RCN3Q96D15 328 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 SENP5Q96HI0 755 aaPredicted RBP15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 FER1L6-AS2Q96M78 137 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 PHF12Q96QT6 1004 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 INPP5KQ9BT40 448 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 OR8D2Q9GZM6 311 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 CXorf36Q9H7Y0 433 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 P4HTMQ9NXG6 502 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 PPIEQ9UNP9 301 aaKnown RBP15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 ERVK-19Q9WJR5 959 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 CFL2Q9Y281 166 aa15.38■□□□□ 0.05
TSPAN4-208ENST00000409531 TLN1Q9Y490 2541 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 IGHV3-20A0A0C4DH32 117 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 PRAMEF2O60811 474 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 COQ9O75208 318 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 DNAJB5O75953 348 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 CT62P0C5K7 136 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 CCT3P49368 545 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 SLC26A5P58743 744 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 MRPS35P82673 323 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 MGAT2Q10469 447 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 TRMT12Q53H54 448 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 FAM111BQ6SJ93 734 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 C6orf89Q6UWU4 347 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 RETREG3Q86VR2 466 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 OR7G2Q8NG99 324 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 OR1N1Q8NGS0 311 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 C9orf43Q8TAL5 461 aaPredicted RBP15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 SLC2A12Q8TD20 617 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 NPAS2Q99743 824 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 WDR77Q9BQA1 342 aaPredicted RBP15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 PAIP1Q9H074 479 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 SIRT3Q9NTG7 399 aaPredicted RBP15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 ZCCHC3Q9NUD5 404 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 NTMQ9P121 344 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 ZNF639Q9UID6 485 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 C19orf53Q9UNZ5 99 aaPredicted RBP15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 SPTA1P02549 2419 aa15.37■□□□□ 0.05
TSPAN4-208ENST00000409531 UPK1AO00322 258 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 AIM2O14862 343 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 UBOX5O94941 541 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 CBX6O95503 412 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms