RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 FUBP3Q96I24 572 aaKnown RBP eCLIP5.54□□□□□ -1.52
R3HDM1-202ENST00000409478 LCORQ96JN0 433 aaPredicted RBP5.54□□□□□ -1.52
R3HDM1-202ENST00000409478 TEFMQ96QE5 360 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-202ENST00000409478 DDOQ99489 341 aa5.54□□□□□ -1.52
R3HDM1-202ENST00000409478 RNF32Q9H0A6 362 aa5.54□□□□□ -1.52
R3HDM1-202ENST00000409478 ESRP2Q9H6T0 727 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-202ENST00000409478 ASB6Q9NWX5 421 aa5.54□□□□□ -1.52
R3HDM1-202ENST00000409478 MED11Q9P086 117 aa5.54□□□□□ -1.52
R3HDM1-202ENST00000409478 RPS6KB2Q9UBS0 482 aa5.54□□□□□ -1.52
R3HDM1-202ENST00000409478 EDARQ9UNE0 448 aa5.54□□□□□ -1.52
R3HDM1-202ENST00000409478 TMEM5Q9Y2B1 443 aa5.54□□□□□ -1.52
R3HDM1-202ENST00000409478 FAM74A7A6NL05 159 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 LINC00587B1AMM8 73 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 FAAHO00519 579 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 TREHO43280 583 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 TLX2O43763 284 aaPredicted RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 RAMP2O60895 175 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 RGS11O94810 467 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 KDM4BO94953 1096 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SYPP08247 313 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SMIM6P0DI80 62 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 CXCL2P19875 107 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 S100A11P31949 105 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 FEN1P39748 380 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SELENOPP49908 381 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 RAP2BP61225 183 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SOX4Q06945 474 aaPredicted RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 PUM1Q14671 1186 aaKnown RBP eCLIP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 ZSWIM7Q19AV6 140 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SWI5Q1ZZU3 235 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 HFEQ30201 348 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 FAM74A3Q4VXF1 159 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 METTL11BQ5VVY1 283 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 PTRHD1Q6GMV3 140 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 NCEH1Q6PIU2 408 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 UNC5DQ6UXZ4 953 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 PGAP1Q75T13 922 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 LRRC70Q7Z2Q7 622 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 PLEKHH3Q7Z736 793 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 NPAS3Q8IXF0 933 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 OR6S1Q8NH40 331 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 ZDHHC1Q8WTX9 485 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 TCEAL3Q969E4 200 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 TREX2Q9BQ50 279 aaPredicted RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SLC32A1Q9H598 525 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 TMEM38AQ9H6F2 299 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 HMX1Q9NP08 348 aaPredicted RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SLAMF7Q9NQ25 335 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 TMEM30AQ9NV96 361 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 ANXA2P2A6NMY6 339 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 H7C0S8 307 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 ZNF593O00488 134 aaPredicted RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 PRRG1O14668 218 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SOX30O94993 753 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 NFATC1O95644 943 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SRPRAP08240 638 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 C1SP09871 688 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 TFPIP10646 304 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 JUPP14923 745 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 PCSK1P29120 753 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 MC2RQ01718 297 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 ACSM1Q08AH1 577 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 FGL2Q14314 439 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SYT14P1Q58G82 188 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 DCST1Q5T197 706 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 CPTPQ5TA50 214 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 OR2G6Q5TZ20 316 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 CERS6Q6ZMG9 384 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 DEF8Q6ZN54 512 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 DBX2Q6ZNG2 339 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SAMD7Q7Z3H4 446 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 GPR135Q8IZ08 494 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 OXR1Q8N573 874 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 ARRDC4Q8NCT1 418 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 C11orf24Q96F05 449 aaPredicted RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 ZBED3Q96IU2 234 aaPredicted RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 C12orf66Q96MD2 445 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 ZNF582Q96NG8 517 aaPredicted RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SORBS1Q9BX66 1292 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 POLR2J3Q9H1A7 115 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SLC25A32Q9H2D1 315 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 TVP23BQ9NYZ1 205 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 KLK14Q9P0G3 267 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 FKBPLQ9UIM3 349 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 GPR160Q9UJ42 338 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 TSR3Q9UJK0 312 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 TINAGQ9UJW2 476 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 ANGPT4Q9Y264 503 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 MRPL42Q9Y6G3 142 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 A0A0G2JPF8 293 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 PRAMEF25A6NGN4 478 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 IQCF5A8MTL0 148 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 HNRNPCL3B7ZW38 293 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 MCRIP1C9JLW8 97 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 WNT10BO00744 389 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SCAMP2O15127 329 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 PCDH7O60245 1069 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 SOX14O95416 240 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 TRBC1P01850 177 aa5.53□□□□□ -1.52
R3HDM1-202ENST00000409478 LGALS2P05162 132 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms