RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 C16orf58Q96GQ5 468 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 FBXL20Q96IG2 436 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 GAL3ST4Q96RP7 486 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 OR10A5Q9H207 317 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 SLC25A37Q9NYZ2 338 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 VAPAQ9P0L0 249 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 A8MUI8 341 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 SLC22A2O15244 555 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 DYRK3O43781 588 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 MAN1A2O60476 641 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 KCNH1O95259 989 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 HPP00738 406 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 IGKV3-11P04433 115 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 PTPN6P29350 595 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 CHI3L1P36222 383 aaPredicted RBP13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 NUDT2P50583 147 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 SLC37A1P57057 533 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 FUT7Q11130 342 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 LASP1Q14847 261 aaKnown RBP13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 MLC1Q15049 377 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 DCAF10Q5QP82 559 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 DLEU7Q6UYE1 221 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 RNF111Q6ZNA4 994 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 DHDDSQ86SQ9 333 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 C9orf40Q8IXQ3 194 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 SIRT6Q8N6T7 355 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 ZNF615Q8N8J6 731 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 OR1N1Q8NGS0 311 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 C16orf52Q8NHV5 167 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 JADE3Q92613 823 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 TUBB6Q9BUF5 446 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 NEUROD4Q9HD90 331 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 COPS7AQ9UBW8 275 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 TAGLN3Q9UI15 199 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 ZNF639Q9UID6 485 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 VPS4AQ9UN37 437 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 LOC400499M0QZD8 3231 aa13.11□□□□□ -0.31
CHRNA1-204ENST00000409323 EMC8O43402 210 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 T-ENOLP0DO92 83 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 ITGA3P26006 1051 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 EMDP50402 254 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 CORO7P57737 925 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 CXADRP78310 365 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 ZNF155Q12901 538 aaPredicted RBP13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 BIKQ13323 160 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 SELPLGQ14242 412 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 KRT72Q14CN4 511 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 COX20Q5RI15 118 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 BROXQ5VW32 411 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 B3GNTL1Q67FW5 361 aaPredicted RBP13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 PLAG1Q6DJT9 500 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 OR2L13Q8N349 312 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 NATD1Q8N6N6 113 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 ZSCAN1Q8NBB4 408 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 MORN4Q8NDC4 146 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 OR5D16Q8NGK9 328 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 CMTM5Q96DZ9 223 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 THOC3Q96J01 351 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 ITPAQ9BY32 194 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 IKZF5Q9H5V7 419 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 C3orf14Q9HBI5 128 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 MRGBPQ9NV56 204 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 TMEM45AQ9NWC5 275 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 C19orf53Q9UNZ5 99 aaPredicted RBP13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 POLHQ9Y253 713 aa13.1□□□□□ -0.31
CHRNA1-204ENST00000409323 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 A0A096LPI6 279 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 PLOD2O00469 737 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 PLOD3O60568 738 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 ATP5HO75947 161 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 UNC5CO95185 931 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 HMGN2P05204 90 aaKnown RBP13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 ESRRAP11474 423 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 HOXB9P17482 250 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 UQCRC2P22695 453 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 GALNSP34059 522 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 SOX11P35716 441 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 CCL11P51671 97 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 MTPNP58546 118 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 STX5Q13190 355 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 TNFAIP8L2Q6P589 184 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 TMEM64Q6YI46 380 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 MSANTD1Q6ZTZ1 278 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 C6orf120Q7Z4R8 191 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 GALNT10Q86SR1 603 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 RNF130Q86XS8 419 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 C10orf111Q8N326 155 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 GOT1L1Q8NHS2 421 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 PSMA8Q8TAA3 256 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 BRIX1Q8TDN6 353 aaKnown RBP13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 TSPEARQ8WU66 669 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 SLC9A6Q92581 669 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 GIMAP5Q96F15 307 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 VMP1Q96GC9 406 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 LMF1Q96S06 567 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 FAM117AQ9C073 453 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 ING2Q9H160 280 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 SERHL2Q9H4I8 314 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 FOLH1BQ9HBA9 442 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms