RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ZNF628Q5EBL2 1059 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 SLC22A10Q63ZE4 541 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 TMEM64Q6YI46 380 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 DND1Q8IYX4 353 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 FAM9CQ8IZT9 166 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 ZFP62Q8NB50 900 aaPredicted RBP16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 SIMC1Q8NDZ2 872 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 FAM13CQ8NE31 585 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 OR52R1Q8NGF1 315 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 FCRL1Q96LA6 429 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 CCT7Q99832 543 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 GIMAP2Q9UG22 337 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 BAIAP2L1Q9UHR4 511 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 EXO1Q9UQ84 846 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 ATP6AP2A0A1C7CYW4 349 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 CAPN14A8MX76 684 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 MYO1GB0I1T2 1018 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 TFECO14948 347 aaPredicted RBP16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 ASNA1O43681 348 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 ATP6AP2O75787 350 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 BCAS2O75934 225 aaPredicted RBP16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 JUNP05412 331 aaKnown RBP16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 FBXO45P0C2W1 286 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 CCL3P10147 92 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 SDC1P18827 310 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 NTSP30990 170 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 SLC1A6P48664 564 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 NCBP2P52298 156 aaKnown RBP eCLIP16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 NRG3P56975 720 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 DUSP8Q13202 625 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 STX3Q13277 289 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 ATP6AP1LQ52LC2 224 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 XKR7Q5GH72 579 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 FAM47EQ6ZV65 393 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 SIAH3Q8IW03 269 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 OR2M7Q8NG81 312 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 ERP27Q96DN0 273 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 C3orf30Q96M34 536 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 GPR137Q96N19 417 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 TSSK3Q96PN8 268 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 FAM173AQ9BQD7 235 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 PRODH2Q9UF12 536 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 DTX4Q9Y2E6 619 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 RAP2CQ9Y3L5 183 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 NPFFR2Q9Y5X5 522 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 HIVEP3Q5T1R4 2406 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 PINLYPA6NC86 204 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 AKAP10O43572 662 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 SNUPNO95149 360 aaKnown RBP16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 LRATO95237 230 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 BCKDHAP12694 445 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 MAPK1P28482 360 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 PLGLB1Q02325 96 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 RBPJQ06330 500 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 ZNF781Q8N8C0 355 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 C17orf47Q8NEP4 570 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 OR5M3Q8NGP4 307 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 CLHC1Q8NHS4 586 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 MGARPQ8TDB4 240 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 PAQR8Q8TEZ7 354 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 TLCD1Q96CP7 247 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 ITPAQ9BY32 194 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 C20orf27Q9GZN8 174 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 NXF5Q9H1B4 397 aaKnown RBP16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 ANKRA2Q9H9E1 313 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 SLC5A6Q9Y289 635 aa16.54■□□□□ 0.24
PDLIM2-206ENST00000409141 A0A0G2JMM0 328 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 A0A1W2PPB8 328 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 A0A1W2PRS3 328 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 KIR3DP1A8MWS1 328 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 TP53I11O14683 189 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 HS6ST1O60243 411 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 PIGAP37287 484 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 ASMTP46597 345 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 EMDP50402 254 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 RPL14P50914 215 aaKnown RBP16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 WDR4P57081 412 aaKnown RBP16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 DCAF7P61962 342 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 NNATQ16517 81 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 NTRK2Q16620 822 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 C6orf136Q5SQH8 315 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 GK5Q6ZS86 529 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 PRR22Q8IZ63 422 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 OR10G3Q8NGC4 313 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 TUBGCP3Q96CW5 907 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 LCORQ96JN0 433 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 REEP4Q9H6H4 257 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 SH2D2AQ9NP31 389 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 NKIRAS1Q9NYS0 192 aa16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 ERRFI1Q9UJM3 462 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-206ENST00000409141 LRRTM2O43300 516 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 PLOD3O60568 738 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 STSP08842 583 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 PPICP45877 212 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 DNASE1L1P49184 302 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 TMED10P49755 219 aaKnown RBP16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 SLC18A1P54219 525 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 FBXW4P57775 412 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 PPIAP62937 165 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms