RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 CELSR2Q9HCU4 2923 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 A0A0G2JMM0 328 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 A0A1W2PPB8 328 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 A0A1W2PRS3 328 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 KIR3DP1A8MWS1 328 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 GOLGA8RI6L899 631 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 ADAM10O14672 748 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 ZNF354AO60765 605 aaPredicted RBP8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 CHEK2O96017 543 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 CLPSP04118 112 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 IL3P08700 152 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 TSPAN8P19075 237 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 GPX3P22352 226 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 MPIP34949 423 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 CRHR1P34998 444 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 FEN1P39748 380 aaKnown RBP8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 DNAJB13P59910 316 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 ZNF763Q0D2J5 394 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 PLCXD2Q0VAA5 305 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 SNTA1Q13424 505 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 PRICKLE4Q2TBC4 344 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 SPDYAQ5MJ70 313 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 SLC30A6Q6NXT4 461 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 ZNF585AQ6P3V2 769 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 TMEM81Q6P7N7 255 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 SCIMPQ6UWF3 145 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 IKBIPQ70UQ0 350 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 NUP54Q7Z3B4 507 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 PM20D2Q8IYS1 436 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 FAM9CQ8IZT9 166 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 SPPL2AQ8TCT8 520 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 TM4SF18Q96CE8 201 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 TMCO6Q96DC7 493 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 TMEM41AQ96HV5 264 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 LCORQ96JN0 433 aaPredicted RBP8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 TRMOQ9BU70 441 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 METTL7AQ9H8H3 244 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 MIEF1Q9NQG6 463 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 SIRT5Q9NXA8 310 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 MAT2BQ9NZL9 334 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 CES1P1Q9UKY3 287 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 DLGAP4Q9Y2H0 992 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 CACNA1CQ13936 2221 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 ABCA12Q86UK0 2595 aa8.35□□□□□ -1.07
SNORD88A-201ENST00000408314 FRG2CA6NGY1 282 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 LRRC3CA6NJW4 275 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 PPP6CO00743 305 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 COQ9O75208 318 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 TRIM3O75382 744 aaPredicted RBP8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 PPM1BO75688 479 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 RSL1D1O76021 490 aaKnown RBP8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 WISP2O76076 250 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 ANXA4P09525 319 aaPredicted RBP8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 CT62P0C5K7 136 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 FAM153BP0C7A2 387 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 NEFHP12036 1026 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 CPA3P15088 417 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 CAPN3P20807 821 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 DRD5P21918 477 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 ABCD3P28288 659 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 GRNP28799 593 aaKnown RBP8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 NTSP30990 170 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 PPICP45877 212 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 ZFP36L2P47974 494 aaKnown RBP8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 EFR3AQ14156 821 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 SLC25A35Q3KQZ1 300 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 FAM153CQ494X1 144 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 C1orf185Q5T7R7 199 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 C3P1Q6ZMU1 363 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 FRMD7Q6ZUT3 714 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 RPS27LQ71UM5 84 aaKnown RBP8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 CLYBLQ8N0X4 340 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 OR10Q1Q8NGQ4 319 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 LILRB4Q8NHJ6 448 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 NEIL3Q8TAT5 605 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 MZB1Q8WU39 189 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 ADIPOR1Q96A54 375 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 CTHRC1Q96CG8 243 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 C14orf79Q96F83 325 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 CNRIP1Q96F85 164 aaPredicted RBP8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 RILPQ96NA2 401 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 BBS4Q96RK4 519 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 HBEGFQ99075 208 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 OSBPL11Q9BXB4 747 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 ITPAQ9BY32 194 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 ANGPTL4Q9BY76 406 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 ACPTQ9BZG2 426 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 GSTO2Q9H4Y5 243 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 L2HGDHQ9H9P8 463 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 HHATLQ9HCP6 504 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 PNPLA3Q9NST1 481 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 KLRF1Q9NZS2 232 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 ZNF225Q9UK10 706 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 RNF6Q9Y252 685 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 C15orf41Q9Y2V0 281 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 DNAJC13O75165 2243 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 ZNF407Q9C0G0 2248 aa8.34□□□□□ -1.07
SNORD88A-201ENST00000408314 C15orf38-AP3S2A0A0A6YYH1 394 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 A0A1B0GTL3 188 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 OR6C70A6NIJ9 312 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms