RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ATP12AP54707 1039 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 MYL6P60660 151 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 FOLH1Q04609 750 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 INCA1Q0VD86 236 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 HYAL1Q12794 435 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 CUL2Q13617 745 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 UPP1Q16831 310 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 ZNF699Q32M78 642 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 GLRA4Q5JXX5 417 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 CLLU1OSQ5K130 101 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 GFI1BQ5VTD9 330 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 FAM46CQ5VWP2 391 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 WDR59Q6PJI9 974 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 DEFB128Q7Z7B8 93 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 HOGA1Q86XE5 327 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 ZNF677Q86XU0 584 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 FAM71AQ8IYT1 594 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 CCDC170Q8IYT3 715 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 RCOR2Q8IZ40 523 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 LRRC43Q8N309 656 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 RAB42Q8N4Z0 105 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 PHOSPHO2Q8TCD6 241 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 TOP1MTQ969P6 601 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 ZNF486Q96H40 463 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 RBM41Q96IZ5 413 aaKnown RBP4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 MAGED4Q96JG8 741 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 CASD1Q96PB1 797 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 BTBD9Q96Q07 612 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 LPAR4Q99677 370 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 GPATCH1Q9BRR8 931 aaKnown RBP4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 MLPHQ9BV36 600 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 RBM4Q9BWF3 364 aaKnown RBP4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 DNAI2Q9GZS0 605 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 P2RY12Q9H244 342 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 CXCL16Q9H2A7 254 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 MTIF3Q9H2K0 278 aaKnown RBP4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 EGLN3Q9H6Z9 239 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 RNF121Q9H920 327 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 PLCXD1Q9NUJ7 323 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 TBC1D13Q9NVG8 400 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 TUBGCP4Q9UGJ1 667 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 BARX2Q9UMQ3 279 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 WDR37Q9Y2I8 494 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 HBS1LQ9Y450 684 aaKnown RBP4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 KLK4Q9Y5K2 254 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 ZFP37Q9Y6Q3 630 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 ANAPC1Q9H1A4 1944 aa4.31□□□□□ -1.72
HMGB3P19-201ENST00000403971 ATP8B3O60423 1300 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 A0A087WUV0 522 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 A0A1W2PR80 420 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 MEIOCA2RUB1 952 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 MTMR11A4FU01 709 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 KPNA7A9QM74 516 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 TRAPPC3O43617 180 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 HUS1O60921 280 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 NME6O75414 186 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 GJB5O95377 273 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 LCA5LO95447 670 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 PAEPP09466 180 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 CD59P13987 128 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 CEBPBP17676 345 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 WARSP23381 471 aaKnown RBP4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 CYLC1P35663 651 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 TNNC1P63316 161 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 CSNK2BP67870 215 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 CCZ1BP86790 482 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 CCZ1P86791 482 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 YWHAHQ04917 246 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 IL10RBQ08334 325 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 ELAVL2Q12926 359 aaKnown RBP4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 ITGA9Q13797 1035 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 E2F5Q15329 346 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 SPOPLQ6IQ16 392 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 PPP1R2P3Q6NXS1 205 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 LEKR1Q6ZMV7 388 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 CPEB2Q7Z5Q1 589 aaKnown RBP4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 VPS36Q86VN1 386 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 HOOK3Q86VS8 718 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 UNC93AQ86WB7 457 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 GPR65Q8IYL9 337 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 TMEM86AQ8N2M4 240 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 ATAD1Q8NBU5 361 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 OR10G8Q8NGN5 311 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 BADQ92934 168 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 C18orf25Q96B23 403 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 ZNF689Q96CS4 500 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 TRIM44Q96DX7 344 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 SGF29Q96ES7 293 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 CDCA3Q99618 268 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 SYT11Q9BT88 431 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 COPS7BQ9H9Q2 264 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 FGF22Q9HCT0 170 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 GMEB2Q9UKD1 530 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 KIAA1257Q9ULG3 409 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 ATG2AQ2TAZ0 1938 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 MYO16Q9Y6X6 1858 aa4.3□□□□□ -1.72
HMGB3P19-201ENST00000403971 OBSL1O75147 1896 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 CYB561D2O14569 222 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 SLC30A4O14863 429 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 CTDSPLO15194 276 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms