RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 CCL4L1Q8NHW4 92 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 ELF4Q99607 663 aaPredicted RBP15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 ZDHHC5Q9C0B5 715 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 SLC6A16Q9GZN6 736 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 CPNE5Q9HCH3 593 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 A4GALTQ9NPC4 353 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 SPATA7Q9P0W8 599 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 TAAR2Q9P1P5 351 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 KCND3Q9UK17 655 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 KCNK6Q9Y257 313 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 KNL1Q8NG31 2342 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 PI4KAP42356 2102 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 PATE3B3GLJ2 98 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 TBX19O60806 448 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 SEMA3DO95025 777 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 DBTP11182 482 aaKnown RBP15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 EIF2B2P49770 351 aaKnown RBP15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 LIMK1P53667 647 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 ZNF45Q02386 682 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 PRKCDQ05655 676 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 PTGES3Q15185 160 aaKnown RBP15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 TIMM50Q3ZCQ8 353 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 PRRT3Q5FWE3 981 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 VN1R5Q7Z5H4 357 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 SLC9B2Q86UD5 537 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 TAGAPQ8N103 731 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 SDR16C5Q8N3Y7 309 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 B3GNT7Q8NFL0 401 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 ATOH1Q92858 354 aaPredicted RBP15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 GTPBP3Q969Y2 492 aaKnown RBP15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 NEURL3Q96EH8 262 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 LRRC61Q9BV99 259 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 GSDMCQ9BYG8 508 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 CLN6Q9NWW5 311 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 SCHIP1Q9P0W5 487 aaPredicted RBP15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 PCOLCE2Q9UKZ9 415 aa15.04■□□□□ -0
CHRFAM7A-203ENST00000401522 PCM1Q15154 2024 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 C5orf58C9J3I9 102 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 DSCR3O14972 297 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 AK4P27144 223 aaPredicted RBP15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 SERPINB1P30740 379 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 S100A5P33763 92 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 NBL1P41271 181 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 MAGEA8P43361 318 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 ALDH9A1P49189 494 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 ARRB1P49407 418 aaPredicted RBP15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 CRISP1P54107 249 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 ELOCQ15369 112 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 MAPK11Q15759 364 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 CYP27C1Q4G0S4 372 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 COLEC12Q5KU26 742 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 KLHL17Q6TDP4 642 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 WASH2PQ6VEQ5 465 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 LYSMD2Q8IV50 215 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 OR5P2Q8WZ92 322 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 TMEM121BQ9BXQ6 578 aaPredicted RBP15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 C6orf62Q9GZU0 229 aaPredicted RBP15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 OR52A5Q9H2C5 316 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 CXorf36Q9H7Y0 433 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 WASH6PQ9NQA3 447 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 INIPQ9NRY2 104 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 IFT52Q9Y366 437 aa15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 CFAP20Q9Y6A4 193 aaKnown RBP15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 TP53BP1Q12888 1972 aaPredicted RBP15.03■□□□□ -0
CHRFAM7A-203ENST00000401522 LOC100506127A0A0U1RQW1 187 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 ARHGAP33O14559 1287 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 KDM1AO60341 852 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 ADAP00813 363 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 SYPP08247 313 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 PIPP12273 146 aaPredicted RBP15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 DDCP20711 480 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 CHMP24386 653 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 GRK5P34947 590 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 ACTR1BP42025 376 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 ACTR1AP61163 376 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 GANABQ14697 944 aaKnown RBP15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 HLA-BQ31612 363 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 SAXO2Q658L1 398 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 FRMPD2BQ6IN97 320 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 ZNF770Q6IQ21 691 aaPredicted RBP15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 CEACAM20Q6UY09 585 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 PTCHD4Q6ZW05 846 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 FAM129CQ86XR2 697 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 LMNTD1Q8N9Z9 388 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 ZNF740Q8NDX6 193 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 RAD51AP1Q96B01 352 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 CDADC1Q9BWV3 514 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 OR51E2Q9H255 320 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 RHBGQ9H310 441 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 OSGEPL1Q9H4B0 414 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 NMNAT1Q9HAN9 279 aaPredicted RBP15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 ZNF229Q9UJW7 825 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 PEX16Q9Y5Y5 336 aa15.02■□□□□ -0
CHRFAM7A-203ENST00000401522 DSPPQ9NZW4 1301 aa15.02□□□□□ -0.01
CHRFAM7A-203ENST00000401522 KHNYNO15037 678 aaKnown RBP15.02□□□□□ -0.01
CHRFAM7A-203ENST00000401522 PIAS2O75928 621 aa15.02□□□□□ -0.01
CHRFAM7A-203ENST00000401522 RECKO95980 971 aa15.02□□□□□ -0.01
CHRFAM7A-203ENST00000401522 GASTP01350 101 aa15.02□□□□□ -0.01
CHRFAM7A-203ENST00000401522 POU2F1P14859 743 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms