RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 MAN2A2P49641 1150 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 SUMO3P55854 103 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 RAB38P57729 211 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 HMBOX1Q6NT76 420 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ARMC6Q6NXE6 501 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 LACC1Q8IV20 430 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TRIM48Q8IWZ4 208 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 CYP4Z2PQ8N1L4 340 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TSTD1Q8NFU3 115 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 BRIX1Q8TDN6 353 aaKnown RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 JPH3Q8WXH2 748 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 FUZQ9BT04 418 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 SLC35A3Q9Y2D2 325 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 CDH10Q9Y6N8 788 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 CREBBPQ92793 2442 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TMEM202A6NGA9 273 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 TAF4O00268 1085 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 UBXN7O94888 489 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ETHE1O95571 254 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 GPC1P35052 558 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ACTC1P68032 377 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ACTA1P68133 377 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTPRD-206ENST00000397617 DCST1Q5T197 706 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 PRSS42Q7Z5A4 293 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 PLXDC1Q8IUK5 500 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 FNDC8Q8TC99 324 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ADAMTS15Q8TE58 950 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ESAMQ96AP7 390 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 SLC41A2Q96JW4 573 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 SLC38A2Q96QD8 506 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 SMIM14Q96QK8 99 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 KCMF1Q9P0J7 381 aa5.53□□□□□ -1.52
PTPRD-206ENST00000397617 ERI3O43414 337 aaKnown RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 RCBTB2O95199 551 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 HLA-EP13747 358 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CPMP14384 443 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CD38P28907 300 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CRYBA2P53672 197 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SCAND1P57086 179 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 OCA2Q04671 838 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 ALG11Q2TAA5 492 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 NADK2Q4G0N4 442 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 MFSD4BQ5TF39 518 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 METAP1DQ6UB28 335 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF687Q8N1G0 1237 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 OR7A2PQ8NGA2 310 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 C1orf216Q8TAB5 229 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 BMFQ96LC9 184 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 UBE2ZQ9H832 354 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 IL21RQ9HBE5 538 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SLC23A2Q9UGH3 650 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 MBD1Q9UIS9 605 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 ZFR2Q9UPR6 939 aaKnown RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 NPIPB9F8W1W9 429 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 H7BY64 318 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 XPNPEP2O43895 674 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 GALR3O60755 368 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 NDUFV2P19404 249 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 NEK2P51955 445 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 UGT2B15P54855 530 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CTBP2P56545 445 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CDK5R2Q13319 367 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SF1Q15637 639 aaKnown RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 NPTX1Q15818 432 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 TMPRSS11FQ6ZWK6 438 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 AMIGO2Q86SJ2 522 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 GID4Q8IVV7 300 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SPDYE1Q8NFV5 336 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 OR10G2Q8NGC3 310 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 PRAP1Q96NZ9 151 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 ACER3Q9NUN7 267 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 IMP3Q9NV31 184 aaKnown RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 FER1L5A0AVI2 2057 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 IGLV3-12A0A075B6K2 115 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 A0A1W2PR77 199 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 FZD7O75084 574 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SNAPC5O75971 98 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 GABRB1P18505 474 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SMSP52788 366 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 HYAL2Q12891 473 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CLCA4Q14CN2 919 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 RFLNAQ6ZTI6 216 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF367Q7RTV3 350 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 DND1Q8IYX4 353 aaKnown RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SETD6Q8TBK2 473 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 FAM3CQ92520 227 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 FBXL20Q96IG2 436 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CMTM3Q96MX0 182 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 GPX7Q96SL4 187 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 TBC1D23Q9NUY8 699 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SUFUQ9UMX1 484 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 ERVK-11Q9UQG0 969 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CKMT1AP12532 417 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 TAS2R43P59537 309 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SRP54P61011 504 aaKnown RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 KCNJ10P78508 379 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 POU4F2Q12837 409 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 DNAJC22Q8N4W6 341 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 TTC16Q8NEE8 873 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms