RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SLC48A1Q6P1K1 146 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 MYO7BQ6PIF6 2116 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 IL20RBQ6UXL0 311 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 RNF111Q6ZNA4 994 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 C16orf47Q6ZP98 133 aaPredicted RBP13.48□□□□□ -0.25
SEC13-208ENST00000397109 DGAT2L6Q6ZPD8 337 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 ZNF781Q8N8C0 355 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 SLC22A8Q8TCC7 542 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 UCN3Q969E3 161 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 GPR137Q96N19 417 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 CCDC28BQ9BUN5 200 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 ACPTQ9BZG2 426 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 MMADHCQ9H3L0 296 aaPredicted RBP13.48□□□□□ -0.25
SEC13-208ENST00000397109 CXorf21Q9HAI6 301 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 PNPOQ9NVS9 261 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 ERVK-19Q9WJR5 959 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 TIMM22Q9Y584 194 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 WIPF3A6NGB9 483 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 CAPN14A8MX76 684 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 PEX1O43933 1283 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 OR6B1O95007 311 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 LDLRP01130 860 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 CPMP14384 443 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 ZNF24P17028 368 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 SOX3P41225 446 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 GSTM5P46439 218 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 MEOX1P50221 254 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 HTR6P50406 440 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 FOXA1P55317 472 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 SLC37A1P57057 533 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 IRX1P78414 480 aaPredicted RBP13.48□□□□□ -0.25
SEC13-208ENST00000397109 RIPK1Q13546 671 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 IMPG1Q17R60 797 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 UGT3A2Q3SY77 523 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 RTL4Q6ZR62 310 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 MDGA2Q7Z553 956 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 SULF2Q8IWU5 870 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 GALNT12Q8IXK2 581 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 C9orf40Q8IXQ3 194 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 CLYBLQ8N0X4 340 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 CPSF7Q8N684 471 aaKnown RBP13.48□□□□□ -0.25
SEC13-208ENST00000397109 GOLM1Q8NBJ4 401 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 PSD4Q8NDX1 1056 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 KCNA7Q96RP8 456 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 CCDC106Q9BWC9 280 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 C1orf21Q9H246 121 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 MARCOQ9UEW3 520 aaPredicted RBP13.48□□□□□ -0.25
SEC13-208ENST00000397109 ZDHHC2Q9UIJ5 367 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 CES1P1Q9UKY3 287 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 TRAF6Q9Y4K3 522 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 DOPEY1Q5JWR5 2465 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 GTF3C1Q12789 2109 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 GNG14A0A1W2PPG7 69 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 NPIPA5E9PKD4 350 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 HRKO00198 91 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 LRRTM2O43300 516 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 ASNA1O43681 348 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 PCDH7O60245 1069 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 ESRRAP11474 423 aaPredicted RBP13.47□□□□□ -0.25
SEC13-208ENST00000397109 GP1BBP13224 206 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 DRD2P14416 443 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 CSNK2A2P19784 350 aaPredicted RBP13.47□□□□□ -0.25
SEC13-208ENST00000397109 NT5EP21589 574 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 PRDX6P30041 224 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 CASP6P55212 293 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 HMGCS1Q01581 520 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 GALNT18Q6P9A2 607 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 BNC2Q6ZN30 1099 aaPredicted RBP13.47□□□□□ -0.25
SEC13-208ENST00000397109 ACAD11Q709F0 780 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 SIAH3Q8IW03 269 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 DND1Q8IYX4 353 aaKnown RBP13.47□□□□□ -0.25
SEC13-208ENST00000397109 C16orf52Q8NHV5 167 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 RELTQ969Z4 430 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 SLC7A6OSQ96CW6 309 aaPredicted RBP13.47□□□□□ -0.25
SEC13-208ENST00000397109 SHCBP1LQ9BZQ2 653 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 NMUR2Q9GZQ4 415 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 SIRT5Q9NXA8 310 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 NPIPA1Q9UND3 350 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 DNAJC15Q9Y5T4 150 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 ZNF780BQ9Y6R6 833 aa13.47□□□□□ -0.25
SEC13-208ENST00000397109 NPIPB8E9PQR5 432 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 ERAL1O75616 437 aaKnown RBP13.46□□□□□ -0.25
SEC13-208ENST00000397109 ALDH9A1P49189 494 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 SRSF11Q05519 484 aaKnown RBP13.46□□□□□ -0.25
SEC13-208ENST00000397109 FUT7Q11130 342 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 HEPACAMQ14CZ8 416 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 CLEC6AQ6EIG7 209 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 SCIMPQ6UWF3 145 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 TRIM46Q7Z4K8 759 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 SAMD14Q8IZD0 417 aaPredicted RBP13.46□□□□□ -0.25
SEC13-208ENST00000397109 ARHGAP24Q8N264 748 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 GHDCQ8N2G8 530 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 ZFP62Q8NB50 900 aaPredicted RBP13.46□□□□□ -0.25
SEC13-208ENST00000397109 OR7G1Q8NGA0 311 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 CMTM5Q96DZ9 223 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 APIPQ96GX9 242 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 METTL2AQ96IZ6 378 aaKnown RBP13.46□□□□□ -0.25
SEC13-208ENST00000397109 MAGED4Q96JG8 741 aa13.46□□□□□ -0.25
SEC13-208ENST00000397109 MAELQ96JY0 434 aaKnown RBP13.46□□□□□ -0.25
SEC13-208ENST00000397109 CCT7Q99832 543 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms