RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 FRMPD1Q5SYB0 1578 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CEP170BQ9Y4F5 1589 aaPredicted RBP6.86□□□□□ -1.31
UPF2-203ENST00000397053 FOXO6A8MYZ6 492 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 F5H5K5 113 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 SLC16A8O95907 504 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 ATF4P18848 351 aaPredicted RBP6.86□□□□□ -1.31
UPF2-203ENST00000397053 ADAM17P78536 824 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 ZNF33BQ06732 778 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 UGT8Q16880 541 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 PIGGQ5H8A4 983 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 LRRN1Q6UXK5 716 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 SHISA6Q6ZSJ9 500 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 Q6ZSR6 202 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 TPRA1Q86W33 373 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CMTM1Q8IZ96 169 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 BANPQ8N9N5 519 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 SLC37A3Q8NCC5 494 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 OR4K15Q8NH41 348 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 NPY6RQ99463 290 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CHRDQ9H2X0 955 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 NANOGQ9H9S0 305 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 NLE1Q9NVX2 485 aaPredicted RBP6.86□□□□□ -1.31
UPF2-203ENST00000397053 ENTPD2Q9Y5L3 495 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 TRBV2A0A0J9YWF9 115 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 A0A1W2PPK0 400 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 ZNF840PA6NDX5 716 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 EEF1E1-BLOC1S5C9J1V9 151 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 EEF1E1O43324 174 aaKnown RBP6.86□□□□□ -1.31
UPF2-203ENST00000397053 PRAMEF2O60811 474 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 PIGRP01833 764 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 UNGP13051 313 aaPredicted RBP6.86□□□□□ -1.31
UPF2-203ENST00000397053 GRPRP30550 384 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 S100A7P31151 101 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 MAGEA8P43361 318 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 FADDQ13158 208 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 PDE7AQ13946 482 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 NFE2L1Q14494 772 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CDKN3Q16667 212 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 SLC18B1Q6NT16 456 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 KLHDC8AQ8IYD2 350 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 NIPA2Q8N8Q9 360 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 LSM14AQ8ND56 463 aaKnown RBP6.86□□□□□ -1.31
UPF2-203ENST00000397053 NDNFQ8TB73 568 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CHPT1Q8WUD6 406 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 RSC1A1Q92681 617 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 TMEM74Q96NL1 305 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 EBF4Q9BQW3 602 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 GNG13Q9P2W3 67 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 PCTPQ9UKL6 214 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 MKLN1Q9UL63 735 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 MYO10Q9HD67 2058 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 TMEM233B4DJY2 109 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 PDLIM1O00151 329 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 LATO43561 262 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CBX7O95931 251 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 ADRB3P13945 408 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 ZNF44P15621 663 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 ZNF136P52737 540 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CTXN1P60606 82 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 TUBA3CQ13748 450 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 ARHGAP11AQ6P4F7 1023 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 RBMS3Q6XE24 437 aaKnown RBP6.86□□□□□ -1.31
UPF2-203ENST00000397053 HMGN2P46Q86SG4 172 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 TEX26Q8N6G2 289 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 SLC35B2Q8TB61 432 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 GAB3Q8WWW8 586 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 C12orf43Q96C57 262 aaKnown RBP6.86□□□□□ -1.31
UPF2-203ENST00000397053 TOE1Q96GM8 510 aaKnown RBP6.86□□□□□ -1.31
UPF2-203ENST00000397053 EBF2Q9HAK2 575 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 OBP2BQ9NPH6 170 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 POLE4Q9NR33 117 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 DMAC2Q9NW81 257 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 TUBA8Q9NY65 449 aaPredicted RBP6.86□□□□□ -1.31
UPF2-203ENST00000397053 EMC3Q9P0I2 261 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 BOKQ9UMX3 212 aaPredicted RBP6.86□□□□□ -1.31
UPF2-203ENST00000397053 A0A0A6YYH2 397 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 C2orf78A6NCI8 922 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 A6NJ64 397 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CLCA1A8K7I4 914 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 HCRTO43612 131 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 OR2T1O43869 369 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 S1PR4O95977 384 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 SLC10A3P09131 477 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CTSAP10619 480 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 IL1R2P27930 398 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CX3CR1P49238 355 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 HTRA3P83110 453 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 MAB21L1Q13394 359 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 BCL2L15Q5TBC7 163 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 SMYD5Q6GMV2 418 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 ZNF765Q7L2R6 523 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 C14orf80Q86SX3 495 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 FITM2Q8N6M3 262 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 C4orf32Q8N8J7 132 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 OR6C4Q8NGE1 309 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 WDR20Q8TBZ3 569 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 CASD1Q96PB1 797 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 ALOXE3Q9BYJ1 711 aa6.86□□□□□ -1.31
UPF2-203ENST00000397053 NXF5Q9H1B4 397 aaKnown RBP6.86□□□□□ -1.31
UPF2-203ENST00000397053 ZNF160Q9HCG1 818 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms