RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 H0YCG3 227 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 H0YL77 283 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 E2F3O00716 465 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZNF749O43361 778 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 SPAG6O75602 509 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 TOXO94900 526 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 DUS4LO95620 317 aaKnown RBP4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 MBD3O95983 291 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 ASNSP08243 561 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 PRG2P13727 222 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 TSPAN8P19075 237 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 RFC2P35250 354 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 DLSTP36957 453 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 PPIAP62937 165 aaKnown RBP4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZNF177Q13360 481 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 ENPP2Q13822 863 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 EXOSC2Q13868 293 aaKnown RBP4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 KIAA0141Q14154 515 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 TMEM187Q14656 261 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 UPP1Q16831 310 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 PARP6Q2NL67 630 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 UNC50Q53HI1 259 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 NCR3LG1Q68D85 454 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 NIPAL3Q6P499 406 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 ARHGAP11AQ6P4F7 1023 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 CBLN3Q6UW01 205 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 USP43Q70EL4 1123 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 IQCF2Q8IXL9 164 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 CCDC36Q8IYA8 594 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 OR52M1Q8NGK5 317 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 FBXO30Q8TB52 745 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 SLC5A11Q8WWX8 675 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 ATXN7L3BQ96GX2 97 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 FAM210AQ96ND0 272 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 TNFRSF13CQ96RJ3 184 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 CPXM1Q96SM3 734 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 KRTAP4-5Q9BYR2 181 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 TMEM117Q9H0C3 514 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 ALG9Q9H6U8 611 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 KAT8Q9H7Z6 458 aaKnown RBP4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 RMND5AQ9H871 391 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 WDR76Q9H967 626 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 Q9HAA7 133 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 WDR41Q9HAD4 459 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 GDAP2Q9NXN4 497 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 GPR83Q9NYM4 423 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 TUBGCP4Q9UGJ1 667 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZNF580Q9UK33 172 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 FZR1Q9UM11 496 aa4.19□□□□□ -1.74
HMGB1P10-201ENST00000395823 A0A0A6YYD4 124 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 MEX3AA1L020 520 aaKnown RBP4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 TMCO5BA8MYB1 307 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 NEDD8-MDP1E9PL57 170 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 K7EQG2 157 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 NR5A2O00482 541 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 FBP2O00757 339 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 XPO1O14980 1071 aaKnown RBP4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 MAPK13O15264 365 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 DUSP11O75319 330 aaKnown RBP4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 FRAT2O75474 233 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZNF821O75541 412 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 CHRNA1P02708 482 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 SP1P08047 785 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 IQCF3P0C7M6 154 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 CLUP10909 449 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 CD1DP15813 335 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 ACADVLP49748 655 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 KRTAP10-11P60412 298 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZP4Q12836 540 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 CDKN3Q16667 212 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 SLC36A3Q495N2 470 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 TAF3Q5VWG9 929 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 LCLAT1Q6UWP7 414 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 RGS9BPQ6ZS82 235 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 CBWD2Q8IUF1 395 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZDHHC21Q8IVQ6 265 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 PYROXD2Q8N2H3 581 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 AQP11Q8NBQ7 271 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 OR4F17Q8NGA8 305 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 OR52B6Q8NGF0 335 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 FBXO25Q8TCJ0 367 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 NABP1Q96AH0 204 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 CASD1Q96PB1 797 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 RCHY1Q96PM5 261 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 VPS35Q96QK1 796 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 OR4F4Q96R69 305 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 NT5C3AQ9H0P0 336 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 PARLQ9H300 379 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 B3GAT2Q9NPZ5 323 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 UTP6Q9NYH9 597 aaKnown RBP4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 THAP10Q9P2Z0 257 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 MBD2Q9UBB5 411 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 ATP6V1HQ9UI12 483 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 LRP12Q9Y561 859 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 SF3B1O75533 1304 aaKnown RBP eCLIP4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 AFF2P51816 1311 aa4.18□□□□□ -1.74
HMGB1P10-201ENST00000395823 FBLL1A6NHQ2 334 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms