RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ETV5P41161 510 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 CASP3P42574 277 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 ETV1P50549 477 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 RNF144AP50876 292 aaPredicted RBP12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 CAV3P56539 151 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 MLF2Q15773 248 aaPredicted RBP12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 SLX4IPQ5VYV7 408 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 UNC5DQ6UXZ4 953 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 ADAMTSL4Q6UY14 1074 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 DCUN1D3Q8IWE4 304 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 GANCQ8TET4 914 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 ASB15Q8WXK1 588 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 TRMT61BQ9BVS5 477 aaKnown RBP12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 SP140LQ9H930 580 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 FZD3Q9NPG1 666 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 KCNK6Q9Y257 313 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 GPR55Q9Y2T6 319 aaPredicted RBP12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 MYO10Q9HD67 2058 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 OR52A4PA6NMU1 304 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 LOC110117498-PIK3R3F6TDL0 507 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 SNRNP200O75643 2136 aaKnown RBP12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 OXSR1O95747 527 aaPredicted RBP12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 ADAP00813 363 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 ACP5P13686 325 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 RPL3P39023 403 aaKnown RBP12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 ELOAQ14241 798 aaKnown RBP12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 FGL2Q14314 439 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 SPHARQ15513 63 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 ATAT1Q5SQI0 421 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 C12orf73Q69YU5 71 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 IKBIPQ70UQ0 350 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 NRARPQ7Z6K4 114 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 AKAP14Q86UN6 197 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 LRRTM4Q86VH4 590 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 KIF18BQ86Y91 864 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 UBE2J2Q8N2K1 259 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 OR8K5Q8NH50 307 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 MRPL38Q96DV4 380 aaKnown RBP12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 ARSGQ96EG1 525 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 ZNF354BQ96LW1 612 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 CDCA3Q99618 268 aaPredicted RBP12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 FUZQ9BT04 418 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 RSPH9Q9H1X1 276 aaPredicted RBP12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 SMURF1Q9HCE7 757 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 CPNE5Q9HCH3 593 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 EQTNQ9NQ60 294 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 TIGARQ9NQ88 270 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 CNOT2Q9NZN8 540 aaKnown RBP12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 MSRAQ9UJ68 235 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 AP1M2Q9Y6Q5 423 aa12.72□□□□□ -0.37
GTF2F1-201ENST00000394456 SCG5P05408 212 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 NR2F1P10589 423 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 SSTR4P31391 388 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 GPC1P35052 558 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 CSNK1G2P78368 415 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 ILKQ13418 452 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 LASP1Q14847 261 aaKnown RBP12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 IRF4Q15306 451 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 SPANXN2Q5MJ10 180 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 NDUFAF5Q5TEU4 345 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 ABI3BPQ7Z7G0 1075 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 SIMC1Q8NDZ2 872 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 OR4K5Q8NGD3 323 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 OR5K2Q8NHB8 316 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 SETD7Q8WTS6 366 aaKnown RBP12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 AIF1LQ9BQI0 150 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 POLR2J2Q9GZM3 115 aaKnown RBP12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 MKRN2Q9H000 416 aaKnown RBP12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 ANKHQ9HCJ1 492 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 ZCCHC3Q9NUD5 404 aaKnown RBP12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 IL20RAQ9UHF4 553 aa12.71□□□□□ -0.37
GTF2F1-201ENST00000394456 A8MVJ9 347 aa12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 MED26O95402 600 aa12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 BUD31P41223 144 aaPredicted RBP12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 ZNF45Q02386 682 aa12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 GINS1Q14691 196 aa12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 ZNF79Q15937 498 aa12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 C18orf63Q68DL7 685 aa12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 CCDC116Q8IYX3 515 aa12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 OR9Q1Q8NGQ5 310 aa12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 KLHL6Q8WZ60 621 aa12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 AMDHD1Q96NU7 426 aa12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 INSM2Q96T92 566 aaPredicted RBP12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 PHOX2BQ99453 314 aa12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 RHBGQ9H310 441 aa12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 C6orf106Q9H6K1 298 aaPredicted RBP12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 IMP3Q9NV31 184 aaKnown RBP12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 ZFR2Q9UPR6 939 aaKnown RBP12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 PEX16Q9Y5Y5 336 aa12.71□□□□□ -0.38
GTF2F1-201ENST00000394456 ISPDA4D126 451 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 SH3D21A4FU49 640 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 K7EQS6 105 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 MAT2AP31153 395 aaKnown RBP12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 CSTF2P33240 577 aaKnown RBP eCLIP12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 CCR8P51685 355 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 NCBP2P52298 156 aaKnown RBP eCLIP12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 OLR1P78380 273 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 INSL4Q14641 139 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 HEPACAMQ14CZ8 416 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 CLEC12AQ5QGZ9 265 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms