RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 NXPE4Q6UWF7 544 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 PDZD3Q86UT5 571 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 OR6V1Q8N148 313 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 INO80EQ8NBZ0 244 aaPredicted RBP8.18□□□□□ -1.1
GABRA1-202ENST00000393943 HDHD5Q9BXW7 423 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 ACOXLQ9NUZ1 547 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 FXYD6-FXYD2A0A087WZ82 144 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 STC2O76061 302 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 TSPAN12O95859 305 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 HIST1H2ABP04908 130 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 PRKACAP17612 351 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 IDSP22304 550 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 GALP22466 123 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 MLLT10P55197 1068 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 CASP9P55211 416 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 BDH1Q02338 343 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 MBTPS1Q14703 1052 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 PYCR3Q53H96 274 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 NADSYN1Q6IA69 706 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 HIST3H2AQ7L7L0 130 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 LHFPL3Q86UP9 236 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 NRSN1Q8IZ57 195 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 WFIKKN2Q8TEU8 576 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 PPP1R13LQ8WUF5 828 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 HIST1H2ACQ93077 130 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 FCRL1Q96LA6 429 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 HS6ST2Q96MM7 605 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 FXYD6Q9H0Q3 95 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 A4GALTQ9NPC4 353 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 MAFFQ9ULX9 164 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 MED31Q9Y3C7 131 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 ADAMTSL1Q8N6G6 1762 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 SHROOM3Q8TF72 1996 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 ANHXE9PGG2 379 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 OR1F1O43749 312 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 CELF2O95319 508 aaKnown RBP8.18□□□□□ -1.1
GABRA1-202ENST00000393943 HTR2AP28223 471 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 PPM1AP35813 382 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 BDKRB1P46663 353 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 TMEM35AQ53FP2 167 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 HENMT1Q5T8I9 393 aaKnown RBP8.18□□□□□ -1.1
GABRA1-202ENST00000393943 KLBQ86Z14 1044 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 ADGRF3Q8IZF5 1079 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 PLA2G15Q8NCC3 412 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.18□□□□□ -1.1
GABRA1-202ENST00000393943 TRMT10AQ8TBZ6 339 aaKnown RBP8.18□□□□□ -1.1
GABRA1-202ENST00000393943 KAT2AQ92830 837 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 SGTBQ96EQ0 304 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 ZC3HAV1LQ96H79 300 aaKnown RBP8.18□□□□□ -1.1
GABRA1-202ENST00000393943 OPALINQ96PE5 141 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 OR51V1Q9H2C8 321 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 PELI2Q9HAT8 420 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 C12orf10Q9HB07 376 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 EVPLQ92817 2033 aa8.18□□□□□ -1.1
GABRA1-202ENST00000393943 FABP7O15540 132 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 COCHO43405 550 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 UBL3O95164 117 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 GASTP01350 101 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 SPNP16150 400 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 DDCP20711 480 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 TACR1P25103 407 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 SPINT3P49223 89 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 CAPZA1P52907 286 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 SLC3A1Q07837 685 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 GK2Q14410 553 aaPredicted RBP8.17□□□□□ -1.1
GABRA1-202ENST00000393943 ZNF648Q5T619 568 aaPredicted RBP8.17□□□□□ -1.1
GABRA1-202ENST00000393943 FAM205BPQ63HN1 556 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 FRRS1Q6ZNA5 592 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 RFPL4BQ6ZWI9 263 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 JAZF1Q86VZ6 243 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 ZNF227Q86WZ6 799 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 OR51G2Q8NGK0 314 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 PHYHIPQ92561 330 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 ZNF689Q96CS4 500 aaPredicted RBP8.17□□□□□ -1.1
GABRA1-202ENST00000393943 FYTTD1Q96QD9 318 aaKnown RBP8.17□□□□□ -1.1
GABRA1-202ENST00000393943 RIOK2Q9BVS4 552 aaKnown RBP8.17□□□□□ -1.1
GABRA1-202ENST00000393943 GSX2Q9BZM3 304 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 IKZF5Q9H5V7 419 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 ELAC1Q9H777 363 aaKnown RBP8.17□□□□□ -1.1
GABRA1-202ENST00000393943 LYARQ9NX58 379 aaKnown RBP8.17□□□□□ -1.1
GABRA1-202ENST00000393943 ELOVL2Q9NXB9 296 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 ZNF226Q9NYT6 803 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 B4GALT6Q9UBX8 382 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 UTS2RQ9UKP6 389 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 UBR3Q6ZT12 1888 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 LOC102723532A0A0G2JNH3 316 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 ZNF840PA6NDX5 716 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 GABRPO00591 440 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 SEPT4O43236 478 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 OR6A2O95222 327 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 RAF1P04049 648 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 CSF3P09919 207 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 CMPK1P30085 196 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 RACK1P63244 317 aaKnown RBP8.17□□□□□ -1.1
GABRA1-202ENST00000393943 FAM189BP81408 668 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 TPBGQ13641 420 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 FAM189A2Q15884 450 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 ZBTB37Q5TC79 503 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 ZNF613Q6PF04 617 aa8.17□□□□□ -1.1
GABRA1-202ENST00000393943 CAMKMTQ7Z624 323 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms