RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 A0A0A6YYJ9 748 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 IGHV1OR15-9A0A0B4J2B8 117 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 TRIM3O75382 744 aaPredicted RBP17.96■□□□□ 0.47
CCDC50-202ENST00000392456 TNFRSF21O75509 655 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 MAPK9P45984 424 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 HSD17B7P56937 341 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 KIAA1024LP59773 190 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 IRF8Q02556 426 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 EPS8Q12929 822 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 DAG1Q14118 895 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 NR6A1Q15406 480 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 AP5B1Q2VPB7 878 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 KIAA0895LQ68EN5 471 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 TIGD4Q8IY51 512 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 RDH10Q8IZV5 341 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 OR8H2Q8N162 312 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 PAPD5Q8NDF8 572 aaKnown RBP17.96■□□□□ 0.47
CCDC50-202ENST00000392456 OR6M1Q8NGM8 313 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 UBASH3BQ8TF42 649 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 TRNT1Q96Q11 434 aaKnown RBP17.96■□□□□ 0.47
CCDC50-202ENST00000392456 ACPTQ9BZG2 426 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 LYVE1Q9Y5Y7 322 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 PIPSLA2A3N6 862 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 IFRD1O00458 451 aaPredicted RBP17.96■□□□□ 0.47
CCDC50-202ENST00000392456 GPC1P35052 558 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 PNLIPRP1P54315 467 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 ATP6AP1LQ52LC2 224 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 ZNF542PQ5EBM4 170 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 GLYATQ6IB77 296 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 STK32CQ86UX6 486 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 TRIM48Q8IWZ4 208 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 AURKBQ96GD4 344 aaPredicted RBP17.96■□□□□ 0.47
CCDC50-202ENST00000392456 LINC00052Q96N35 136 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 ORAI3Q9BRQ5 295 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 PPP1R14DQ9NXH3 145 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 TBC1D29Q9UFV1 150 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 MUTYHQ9UIF7 546 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 FKBP7Q9Y680 259 aa17.96■□□□□ 0.47
CCDC50-202ENST00000392456 NCOR1O75376 2440 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 PMS2P1A4D2B8 440 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 C19orf67A6NJJ6 358 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 ALPLP05186 524 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 HOXC4P09017 264 aaPredicted RBP17.95■□□□□ 0.46
CCDC50-202ENST00000392456 SLC2A4P14672 509 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 AKT2P31751 481 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 MASP1P48740 699 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 MTAPQ13126 283 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 TSC22D1Q15714 1073 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 PAMR1Q6UXH9 720 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 TRIM46Q7Z4K8 759 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 DCUN1D3Q8IWE4 304 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 CLRN3Q8NCR9 226 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 RAD51AP1Q96B01 352 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 WDR92Q96MX6 357 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 GAL3ST1Q99999 423 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 SGPP1Q9BX95 441 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 TCEAL2Q9H3H9 227 aaPredicted RBP17.95■□□□□ 0.46
CCDC50-202ENST00000392456 TRIM45Q9H8W5 580 aaPredicted RBP17.95■□□□□ 0.46
CCDC50-202ENST00000392456 SDR39U1Q9NRG7 319 aaPredicted RBP17.95■□□□□ 0.46
CCDC50-202ENST00000392456 FAM118AQ9NWS6 357 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.95■□□□□ 0.46
CCDC50-202ENST00000392456 ARHGEF17Q96PE2 2063 aaPredicted RBP17.95■□□□□ 0.46
CCDC50-202ENST00000392456 PQLC2LA1A4F0 135 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 VPS4BO75351 444 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 CD36P16671 472 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 UFM1P61960 85 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 ALG11Q2TAA5 492 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 GPR139Q6DWJ6 353 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 FAM180BQ6P0A1 224 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 BEND4Q6ZU67 534 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 ZDHHC13Q8IUH4 622 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 KLHDC8AQ8IYD2 350 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 SELENOMQ8WWX9 145 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 ROPN1LQ96C74 230 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 SHDQ96IW2 340 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 OR2M4Q96R27 311 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 PPIL3Q9H2H8 161 aaKnown RBP17.95■□□□□ 0.46
CCDC50-202ENST00000392456 XKR8Q9H6D3 395 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 ERVK-18Q9QC07 812 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 EGFL7Q9UHF1 273 aa17.95■□□□□ 0.46
CCDC50-202ENST00000392456 BDP1A6H8Y1 2624 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 ABCD4O14678 606 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 GNB5O14775 395 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 ARFIP1P53367 373 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 MEF2AQ02078 507 aaPredicted RBP17.94■□□□□ 0.46
CCDC50-202ENST00000392456 TUSC1Q2TAM9 212 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 GGTA1PQ4G0N0 100 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 CAPN13Q6MZZ7 669 aaPredicted RBP17.94■□□□□ 0.46
CCDC50-202ENST00000392456 SLCO4C1Q6ZQN7 724 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 VWA5B2Q8N398 1253 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 ZNF566Q969W8 418 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 FRMD6Q96NE9 622 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 MTERF1Q99551 399 aaKnown RBP17.94■□□□□ 0.46
CCDC50-202ENST00000392456 SLC29A3Q9BZD2 475 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 ELOVL6Q9H5J4 265 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 AIG1Q9NVV5 245 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 TRBV23OR9-2A0A075B6M9 112 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 SMLR1H3BR10 107 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 NME4O00746 187 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 HS6ST1O60243 411 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms