RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 WIPF3A6NGB9 483 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 ACOX3O15254 700 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 LDLRP01130 860 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 DHRS4L1P0CG22 281 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 GRK2P25098 689 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 ASMTP46597 345 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 NR0B1P51843 470 aaKnown RBP11.69□□□□□ -0.54
GGPS1-203ENST00000391855 RPL38P63173 70 aaKnown RBP11.69□□□□□ -0.54
GGPS1-203ENST00000391855 PLGLB1Q02325 96 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 FAM111BQ6SJ93 734 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 Q6ZSR9 355 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 SLC22A16Q86VW1 577 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 TICAM1Q8IUC6 712 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 CCDC116Q8IYX3 515 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 EID3Q8N140 333 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 FBXW8Q8N3Y1 598 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 ADIPOR1Q96A54 375 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 TUBB1Q9H4B7 451 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 IL1RL2Q9HB29 575 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 SH2D2AQ9NP31 389 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 BOKQ9UMX3 212 aaPredicted RBP11.69□□□□□ -0.54
GGPS1-203ENST00000391855 NPFFR2Q9Y5X5 522 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 TRGV8A0A0C4DH27 118 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 ANKRD33BA6NCL7 494 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 MYO1GB0I1T2 1018 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 PIP5K1BO14986 540 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 LSM1O15116 133 aaKnown RBP11.68□□□□□ -0.54
GGPS1-203ENST00000391855 LRRTM2O43300 516 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 PLOD3O60568 738 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 SLC19A2O60779 497 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 TBX19O60806 448 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 COQ9O75208 318 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 HSPA4LO95757 839 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 CBX7O95931 251 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 CCL3P10147 92 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 PCSK2P16519 638 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 RPL3P39023 403 aaKnown RBP11.68□□□□□ -0.54
GGPS1-203ENST00000391855 CA7P43166 264 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 DUSP2Q05923 314 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 LTB4RQ15722 352 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 HYAL4Q2M3T9 481 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 UGT3A2Q3SY77 523 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 XKR7Q5GH72 579 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 RNFT1Q5M7Z0 435 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 BEND6Q5SZJ8 279 aaPredicted RBP11.68□□□□□ -0.54
GGPS1-203ENST00000391855 Q6ZPB1 254 aaPredicted RBP11.68□□□□□ -0.54
GGPS1-203ENST00000391855 SPPL2CQ8IUH8 684 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 FAM109AQ8N4B1 249 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 FAM13CQ8NE31 585 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 ADCY4Q8NFM4 1077 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 OR52R1Q8NGF1 315 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 OR9A2Q8NGT5 310 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 OR2T11Q8NH01 316 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 MTERF3Q96E29 417 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 LCORQ96JN0 433 aaPredicted RBP11.68□□□□□ -0.54
GGPS1-203ENST00000391855 PKNOX2Q96KN3 472 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 PSMG3-AS1Q96PY0 264 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 ITPAQ9BY32 194 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 TTTY12Q9BZ98 90 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 TSPAN10Q9H1Z9 355 aaPredicted RBP11.68□□□□□ -0.54
GGPS1-203ENST00000391855 KCNK9Q9NPC2 374 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 DEPPQ9NTK1 212 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.68□□□□□ -0.54
GGPS1-203ENST00000391855 ZNF835Q9Y2P0 537 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 PTGDR2Q9Y5Y4 395 aa11.68□□□□□ -0.54
GGPS1-203ENST00000391855 ZGRF1Q86YA3 2104 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 A0A087WV62 115 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 FRG2CA6NGY1 282 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 TMEM233B4DJY2 109 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 TO15178 435 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 HS6ST1O60243 411 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 GLSO94925 669 aaPredicted RBP11.67□□□□□ -0.54
GGPS1-203ENST00000391855 LINC00032P0C843 101 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 ABOP16442 354 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 SDC1P18827 310 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 DRD5P21918 477 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 PPICP45877 212 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 PPIAP62937 165 aaKnown RBP11.67□□□□□ -0.54
GGPS1-203ENST00000391855 MRPS35P82673 323 aaKnown RBP11.67□□□□□ -0.54
GGPS1-203ENST00000391855 EXOSC7Q15024 291 aaKnown RBP11.67□□□□□ -0.54
GGPS1-203ENST00000391855 CHI3L2Q15782 390 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 TRMT12Q53H54 448 aaKnown RBP11.67□□□□□ -0.54
GGPS1-203ENST00000391855 CMPK2Q5EBM0 449 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 C1QL3Q5VWW1 255 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 ARHGAP11AQ6P4F7 1023 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 OR10G3Q8NGC4 313 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 ZFP28Q8NHY6 868 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 NXF5Q9H1B4 397 aaKnown RBP11.67□□□□□ -0.54
GGPS1-203ENST00000391855 REEP4Q9H6H4 257 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 ZDHHC11Q9H8X9 412 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 PLSCR2Q9NRY7 297 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 QPCTLQ9NXS2 382 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 B4GALT7Q9UBV7 327 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 CNOT11Q9UKZ1 510 aaKnown RBP11.67□□□□□ -0.54
GGPS1-203ENST00000391855 CHCHD2Q9Y6H1 151 aaPredicted RBP11.67□□□□□ -0.54
GGPS1-203ENST00000391855 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.67□□□□□ -0.54
GGPS1-203ENST00000391855 HIVEP3Q5T1R4 2406 aa11.67□□□□□ -0.54
GGPS1-203ENST00000391855 SVILO95425 2214 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 PLOD2O00469 737 aa11.66□□□□□ -0.54
GGPS1-203ENST00000391855 PRRG2O14669 202 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms