RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SSTR4P31391 388 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 GCKP35557 465 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 KRT6CP48668 564 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 MASP1P48740 699 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 DCAF7P61962 342 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 PSPHP78330 225 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 MAP4K2Q12851 820 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 RASA2Q15283 850 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 TMEM81Q6P7N7 255 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 TIFABQ6ZNK6 161 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 COMMD6Q7Z4G1 85 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 VWA5B2Q8N398 1253 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 KIF18AQ8NI77 898 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 ZNF483Q8TF39 744 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-202ENST00000381208 HSPBAP1Q96EW2 488 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 ANGPTL4Q9BY76 406 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 SHCBP1LQ9BZQ2 653 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 SPRR3Q9UBC9 169 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 TNFRSF10DQ9UBN6 386 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 PRODH2Q9UF12 536 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 ZNF780BQ9Y6R6 833 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 ANKRD17O75179 2603 aaKnown RBP11.91□□□□□ -0.5
RPAIN-202ENST00000381208 ANKHD1Q8IWZ3 2542 aaKnown RBP11.91□□□□□ -0.5
RPAIN-202ENST00000381208 A0A0G2JNJ9 132 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 EXOC1LA0A1B0GW35 172 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 CCDC151A5D8V7 595 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 HPNP05981 417 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 RFPL3SP0C7P2 107 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 ENDOUP21128 410 aaKnown RBP11.91□□□□□ -0.5
RPAIN-202ENST00000381208 ABCD3P28288 659 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 CDK9P50750 372 aaKnown RBP11.91□□□□□ -0.5
RPAIN-202ENST00000381208 SNTA1Q13424 505 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 SPNS3Q6ZMD2 512 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 NUP54Q7Z3B4 507 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 LACC1Q8IV20 430 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 ULK2Q8IYT8 1036 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 GBP7Q8N8V2 638 aaPredicted RBP11.91□□□□□ -0.5
RPAIN-202ENST00000381208 DCAKDQ8WVC6 231 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 ERP27Q96DN0 273 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 TMEM41AQ96HV5 264 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 RILPQ96NA2 401 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 NSUN5Q96P11 429 aaKnown RBP11.91□□□□□ -0.5
RPAIN-202ENST00000381208 VPS29Q9UBQ0 182 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 Q9UFV3 132 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 FOXD3Q9UJU5 478 aaPredicted RBP11.91□□□□□ -0.5
RPAIN-202ENST00000381208 ITGB1BP2Q9UKP3 347 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 CES1P1Q9UKY3 287 aa11.91□□□□□ -0.5
RPAIN-202ENST00000381208 NINQ8N4C6 2090 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 CSMD2Q7Z408 3487 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 C15orf38-AP3S2A0A0A6YYH1 394 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 A8MT66 165 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 DVL2O14641 736 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 PPM1BO75688 479 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 TRAPPC6AO75865 159 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 ZWINTO95229 277 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 EPPINO95925 133 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 PDYNP01213 254 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 CT62P0C5K7 136 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 RHOXF2BP0C7M4 288 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 POU3F2P20265 443 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-202ENST00000381208 TIMP3P35625 211 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 HSD17B3P37058 310 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 CASP3P42574 277 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 GSTM5P46439 218 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 FBXW4P57775 412 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 NAA20P61599 178 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 CLCQ05315 142 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 GALNT1Q10472 559 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-202ENST00000381208 CSTF3Q12996 717 aaKnown RBP11.9□□□□□ -0.5
RPAIN-202ENST00000381208 DUSP8Q13202 625 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 MYBPHQ13203 477 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 PRICKLE4Q2TBC4 344 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 SGO1Q5FBB7 561 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 NHSL2Q5HYW2 709 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 SLC30A6Q6NXT4 461 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 LETMD1Q6P1Q0 360 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 TRMT10CQ7L0Y3 403 aaKnown RBP11.9□□□□□ -0.5
RPAIN-202ENST00000381208 SLC22A9Q8IVM8 553 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 NOA1Q8NC60 698 aaKnown RBP11.9□□□□□ -0.5
RPAIN-202ENST00000381208 DOK4Q8TEW6 326 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 TM4SF18Q96CE8 201 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 LCORQ96JN0 433 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-202ENST00000381208 ZNF382Q96SR6 550 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 BRINP2Q9C0B6 783 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 SLC6A15Q9H2J7 730 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 UBQLN3Q9H347 655 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 METTL7AQ9H8H3 244 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 ZNF629Q9UEG4 869 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-202ENST00000381208 FETUBQ9UGM5 382 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 MCM8Q9UJA3 840 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 EDARQ9UNE0 448 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 C15orf41Q9Y2V0 281 aa11.9□□□□□ -0.5
RPAIN-202ENST00000381208 EML6Q6ZMW3 1958 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 SYT5O00445 386 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 ULK1O75385 1050 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 ERAL1O75616 437 aaKnown RBP11.89□□□□□ -0.51
RPAIN-202ENST00000381208 SUPT7LO94864 414 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 IL2RAP01589 272 aa11.89□□□□□ -0.51
RPAIN-202ENST00000381208 ABCB1P08183 1280 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-202ENST00000381208 DRD2P14416 443 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms