RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 GALNSP34059 522 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 GSTM5P46439 218 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 SLC1A6P48664 564 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 CYB561P49447 251 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 HLCSP50747 726 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 SSR4P51571 173 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 HK2P52789 917 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 UGT3A2Q3SY77 523 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 SLC25A25Q6KCM7 469 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 RPUSD3Q6P087 351 aaKnown RBP8.56□□□□□ -1.04
HMGN1-202ENST00000380747 FAM180AQ6UWF9 173 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 RNF165Q6ZSG1 346 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 Q6ZSR9 355 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 SLC29A4Q7RTT9 530 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 MAMDC2Q7Z304 686 aaPredicted RBP8.56□□□□□ -1.04
HMGN1-202ENST00000380747 C9orf40Q8IXQ3 194 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 LRRC25Q8N386 305 aaPredicted RBP8.56□□□□□ -1.04
HMGN1-202ENST00000380747 GOLGA6L1Q8N7Z2 621 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF781Q8N8C0 355 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 MDS2Q8NDY4 140 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 ADCY4Q8NFM4 1077 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 OR8K3Q8NH51 312 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 GRHL3Q8TE85 626 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 C11orf24Q96F05 449 aaPredicted RBP8.56□□□□□ -1.04
HMGN1-202ENST00000380747 CNRIP1Q96F85 164 aaPredicted RBP8.56□□□□□ -1.04
HMGN1-202ENST00000380747 RASL10BQ96S79 203 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 HES7Q9BYE0 225 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 MYNNQ9NPC7 610 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 AGPAT4Q9NRZ5 378 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.56□□□□□ -1.04
HMGN1-202ENST00000380747 MYOTQ9UBF9 498 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 ERVK-11Q9UQG0 969 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 ENTPD4Q9Y227 616 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 NTNG1Q9Y2I2 539 aa8.56□□□□□ -1.04
HMGN1-202ENST00000380747 YARS2Q9Y2Z4 477 aaKnown RBP8.56□□□□□ -1.04
HMGN1-202ENST00000380747 SHANK1Q9Y566 2161 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 ITPR3Q14573 2671 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 ATP6AP2A0A1C7CYW4 349 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 TMEM200CA6NKL6 621 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 OR6C76A6NM76 312 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 A8MVJ9 347 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 LSM1O15116 133 aaKnown RBP8.55□□□□□ -1.04
HMGN1-202ENST00000380747 AKAP10O43572 662 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 SLC25A12O75746 678 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 ATP6AP2O75787 350 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 NEURL1O76050 574 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 OR6B1O95007 311 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 RASAL1O95294 804 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 SP1P08047 785 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 RNF224P0DH78 156 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 DDCP20711 480 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 TACR1P25103 407 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 TRHRP34981 398 aaPredicted RBP8.55□□□□□ -1.04
HMGN1-202ENST00000380747 DCTP40126 519 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 SLC37A1P57057 533 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 PMP22Q01453 160 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 DUSP2Q05923 314 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 KIAA0040Q15053 153 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 LTB4RQ15722 352 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 PDCD2Q16342 344 aaPredicted RBP8.55□□□□□ -1.04
HMGN1-202ENST00000380747 MAPKAPK3Q16644 382 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 ATP6AP1LQ52LC2 224 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 RFTN2Q52LD8 501 aaPredicted RBP8.55□□□□□ -1.04
HMGN1-202ENST00000380747 XKR7Q5GH72 579 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 HLA-DQA1Q5Y7H0 255 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 FAM71E1Q6IPT2 247 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 FAM111BQ6SJ93 734 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 IL20RBQ6UXL0 311 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 IKBIPQ70UQ0 350 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 GALNTL5Q7Z4T8 443 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 CYP4Z2PQ8N1L4 340 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 ARMC10Q8N2F6 343 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 VWA5B2Q8N398 1253 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 BCORP1Q8N888 145 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 TMEM178AQ8NBL3 297 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 CLHC1Q8NHS4 586 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 ASB15Q8WXK1 588 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 GFM2Q969S9 779 aaKnown RBP8.55□□□□□ -1.04
HMGN1-202ENST00000380747 TMEM125Q96AQ2 219 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 TUBGCP3Q96CW5 907 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 METTL2AQ96IZ6 378 aaKnown RBP8.55□□□□□ -1.04
HMGN1-202ENST00000380747 EGLN2Q96KS0 407 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 PPP1R36Q96LQ0 422 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 PPP3R2Q96LZ3 170 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF681Q96N22 645 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 TSSK3Q96PN8 268 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 BBS4Q96RK4 519 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 CCT7Q99832 543 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 SLC35C2Q9NQQ7 365 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 HPF1Q9NWY4 346 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 MAT2BQ9NZL9 334 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 EHD3Q9NZN3 535 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 BCAP29Q9UHQ4 241 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.55□□□□□ -1.04
HMGN1-202ENST00000380747 RAP2CQ9Y3L5 183 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 CSMD2Q7Z408 3487 aa8.55□□□□□ -1.04
HMGN1-202ENST00000380747 POLEQ07864 2286 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 DOCK10Q96BY6 2186 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 C2orf92A0A1B0GVN3 265 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 A6NHS1 94 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms