RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 LIPT1Q9Y234 373 aa12.97□□□□□ -0.33
KIF3A-201ENST00000378735 TRIP12Q14669 1992 aaPredicted RBP12.97□□□□□ -0.33
KIF3A-201ENST00000378735 GABRPO00591 440 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 CHST10O43529 356 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 LANCL1O43813 399 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 NFATC1O95644 943 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 TBX18O95935 607 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 IGFBP1P08833 259 aaPredicted RBP12.96□□□□□ -0.33
KIF3A-201ENST00000378735 PITPNBP48739 271 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 FLI1Q01543 452 aaPredicted RBP12.96□□□□□ -0.33
KIF3A-201ENST00000378735 PTPRRQ15256 657 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 GSG1Q2KHT4 349 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 CYP27C1Q4G0S4 372 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 C10orf120Q5SQS8 335 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 ASB18Q6ZVZ8 466 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 OAFQ86UD1 273 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 CMIPQ8IY22 773 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 TRPV1Q8NER1 839 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 HHIPL1Q96JK4 782 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 SLC38A2Q96QD8 506 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 HCN3Q9P1Z3 774 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 CARNS1A5YM72 827 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 OR5K4A6NMS3 321 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 UPK3BL1B0FP48 263 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 UPK3BL2E5RIL1 263 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 FAM227AF5H4B4 570 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 LDOC1O95751 146 aaPredicted RBP12.96□□□□□ -0.33
KIF3A-201ENST00000378735 H1F0P07305 194 aaKnown RBP12.96□□□□□ -0.33
KIF3A-201ENST00000378735 PTPN5P54829 565 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 AP1S2P56377 157 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 PUM1Q14671 1186 aaKnown RBP eCLIP12.96□□□□□ -0.33
KIF3A-201ENST00000378735 MINDY4Q4G0A6 757 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 LINC00471Q8N535 108 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 PCNPQ8WW12 178 aaKnown RBP12.96□□□□□ -0.33
KIF3A-201ENST00000378735 UROC1Q96N76 676 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 FUZQ9BT04 418 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 C11orf49Q9H6J7 331 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 GMEB2Q9UKD1 530 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 SLC22A14Q9Y267 594 aa12.96□□□□□ -0.33
KIF3A-201ENST00000378735 SLC22A23A1A5C7 686 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 MTMR11A4FU01 709 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 H0YIV9 168 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 H3BNC9 293 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 MMP20O60882 483 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 KCNJ13O60928 360 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 ACSL1P33121 698 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 MTNR1BP49286 362 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 DGKEP52429 567 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 SHC2P98077 582 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 IRF8Q02556 426 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 HECTD3Q5T447 861 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 HBMQ6B0K9 141 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 PYHIN1Q6K0P9 492 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 RETSATQ6NUM9 610 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 CHMP1BQ7LBR1 199 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 MRPL10Q7Z7H8 261 aaKnown RBP12.96□□□□□ -0.34
KIF3A-201ENST00000378735 LRRC56Q8IYG6 542 aaPredicted RBP12.96□□□□□ -0.34
KIF3A-201ENST00000378735 OR5T2Q8NGG2 359 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 LPPQ93052 612 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 RNFT2Q96EX2 444 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 PKP4Q99569 1192 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 WRAP53Q9BUR4 548 aaKnown RBP12.96□□□□□ -0.34
KIF3A-201ENST00000378735 ZNF304Q9HCX3 659 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 CRLS1Q9UJA2 301 aa12.96□□□□□ -0.34
KIF3A-201ENST00000378735 C2orf78A6NCI8 922 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 PCP4L1A6NKN8 68 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 EFCAB14O75071 495 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 NCR1O76036 304 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 PROS1P07225 676 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 LIMS3P0CW19 117 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 LIMS4P0CW20 117 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 MPC1LP0DKB6 136 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 RPL3P39023 403 aaKnown RBP12.95□□□□□ -0.34
KIF3A-201ENST00000378735 CDK5Q00535 292 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 OPCMLQ14982 345 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 ZMYND11Q15326 602 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 WASH2PQ6VEQ5 465 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 C3P1Q6ZMU1 363 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 CFAP52Q8N1V2 620 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 RNF175Q8N4F7 328 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 HASPINQ8TF76 798 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 ASB11Q8WXH4 323 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 SCRN2Q96FV2 425 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 SLC6A17Q9H1V8 727 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 ACAD8Q9UKU7 415 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 CLCA2Q9UQC9 943 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 ABCD4O14678 606 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 CLDN11O75508 207 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 TFPIP10646 304 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 NPR2P20594 1047 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 NSG1P42857 185 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 GIPRP48546 466 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 ZNF169Q14929 603 aaPredicted RBP12.95□□□□□ -0.34
KIF3A-201ENST00000378735 REEP3Q6NUK4 255 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 SEZ6L2Q6UXD5 910 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 SLC36A4Q6YBV0 504 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 BTN2A1Q7KYR7 527 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 EIF4E3Q8N5X7 224 aaKnown RBP12.95□□□□□ -0.34
KIF3A-201ENST00000378735 REEP4Q9H6H4 257 aa12.95□□□□□ -0.34
KIF3A-201ENST00000378735 GPBP1L1Q9HC44 474 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms