RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 C16orf47Q6ZP98 133 aaPredicted RBP17.36■□□□□ 0.37
SSU72-203ENST00000378725 SLC15A4Q8N697 577 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 GLB1L3Q8NCI6 653 aaPredicted RBP17.36■□□□□ 0.37
SSU72-203ENST00000378725 CATSPER1Q8NEC5 780 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 C17orf47Q8NEP4 570 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 PSMA8Q8TAA3 256 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 OR5P2Q8WZ92 322 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 MARK4Q96L34 752 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 ANKRA2Q9H9E1 313 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 ZIM2Q9NZV7 527 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 NTMQ9P121 344 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 PRODH2Q9UF12 536 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 BCAP29Q9UHQ4 241 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 RALYQ9UKM9 306 aaKnown RBP17.36■□□□□ 0.37
SSU72-203ENST00000378725 CSAG2Q9Y5P2 127 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 NBEAQ8NFP9 2946 aa17.36■□□□□ 0.37
SSU72-203ENST00000378725 C2orf92A0A1B0GVN3 265 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 OR5H15A6NDH6 313 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 E9PBE3 544 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 UPK1AO00322 258 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 PRAMEF2O60811 474 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 SLC22A3O75751 556 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 PSMG1O95456 288 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 NADKO95544 446 aaPredicted RBP17.35■□□□□ 0.37
SSU72-203ENST00000378725 TROVE2P10155 538 aaKnown RBP eCLIP17.35■□□□□ 0.37
SSU72-203ENST00000378725 GPX3P22352 226 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 MC3RP41968 323 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 KIR3DL1P43629 444 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 TNFSF10P50591 281 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 HLCSP50747 726 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 NME5P56597 212 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 ARG2P78540 354 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 KLRB1Q12918 225 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 HSPB3Q12988 150 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 ZNF468Q5VIY5 522 aaPredicted RBP17.35■□□□□ 0.37
SSU72-203ENST00000378725 TEX19Q8NA77 164 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 RASL10BQ96S79 203 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 UTP23Q9BRU9 249 aaKnown RBP17.35■□□□□ 0.37
SSU72-203ENST00000378725 B3GNT3Q9Y2A9 372 aa17.35■□□□□ 0.37
SSU72-203ENST00000378725 PRSS51A0A1B0GVH4 220 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 RNASET2O00584 256 aaKnown RBP17.34■□□□□ 0.37
SSU72-203ENST00000378725 ZNF354AO60765 605 aaPredicted RBP17.34■□□□□ 0.37
SSU72-203ENST00000378725 EFNA1P20827 205 aaPredicted RBP17.34■□□□□ 0.37
SSU72-203ENST00000378725 ZFP36L2P47974 494 aaKnown RBP17.34■□□□□ 0.37
SSU72-203ENST00000378725 CDK9P50750 372 aaKnown RBP17.34■□□□□ 0.37
SSU72-203ENST00000378725 SSR4P51571 173 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 DCAF7P61962 342 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 NFATC3Q12968 1075 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 ATMQ13315 3056 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 TLR1Q15399 786 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 NADK2Q4G0N4 442 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 SPANXN4Q5MJ08 99 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 ANXA8L1Q5VT79 327 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 SLC6A19Q695T7 634 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 OR4F3Q6IEY1 312 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 PTRH1Q86Y79 214 aaKnown RBP17.34■□□□□ 0.37
SSU72-203ENST00000378725 GPALPP1Q8IXQ4 340 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 MIER2Q8N344 545 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 PNPLA2Q96AD5 504 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 MFRPQ9BY79 579 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 SIRT3Q9NTG7 399 aaPredicted RBP17.34■□□□□ 0.37
SSU72-203ENST00000378725 TAS2R9Q9NYW1 312 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 DTX4Q9Y2E6 619 aa17.34■□□□□ 0.37
SSU72-203ENST00000378725 HEMK1Q9Y5R4 338 aaPredicted RBP17.34■□□□□ 0.37
SSU72-203ENST00000378725 A0A0G2JND7 137 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 COQ9O75208 318 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 C6orf47O95873 294 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 F10P00742 488 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 DRD5P21918 477 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 S100A3P33764 101 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 GPC1P35052 558 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 PPICP45877 212 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 CYB561P49447 251 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 ATP4BP51164 291 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 GYS2P54840 703 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 FAM174BQ3ZCQ3 159 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 PLEKHN1Q494U1 663 aaPredicted RBP17.33■□□□□ 0.36
SSU72-203ENST00000378725 METTL21CQ5VZV1 264 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 HLA-DQA1Q5Y7H0 255 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 LYPD8Q6UX82 237 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 ZNF227Q86WZ6 799 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 TMEM156Q8N614 296 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 MDS2Q8NDY4 140 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 CHMP6Q96FZ7 201 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 VSTM2LQ96N03 204 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 SIGLEC12Q96PQ1 595 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 GAL3ST4Q96RP7 486 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 ZBTB18Q99592 522 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 TRIM4Q9C037 500 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 DDX18Q9NVP1 670 aaKnown RBP17.33■□□□□ 0.36
SSU72-203ENST00000378725 TMEM45AQ9NWC5 275 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 ANKRD10Q9NXR5 420 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 ANAPC2Q9UJX6 822 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 ERVK-11Q9UQG0 969 aa17.33■□□□□ 0.36
SSU72-203ENST00000378725 GPR55Q9Y2T6 319 aaPredicted RBP17.33■□□□□ 0.36
SSU72-203ENST00000378725 TNRC6AQ8NDV7 1962 aaKnown RBP17.32■□□□□ 0.36
SSU72-203ENST00000378725 TRAV17A0A0B4J275 112 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 EMC8O43402 210 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 NEURL1O76050 574 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 OR6B1O95007 311 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms