RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 ZNF468Q5VIY5 522 aaPredicted RBP12.78□□□□□ -0.36
PRPF18-202ENST00000378572 PAOXQ6QHF9 649 aa12.78□□□□□ -0.36
PRPF18-202ENST00000378572 QSOX2Q6ZRP7 698 aa12.78□□□□□ -0.36
PRPF18-202ENST00000378572 PAGE2Q7Z2X7 111 aa12.78□□□□□ -0.36
PRPF18-202ENST00000378572 FUNDC1Q8IVP5 155 aa12.78□□□□□ -0.36
PRPF18-202ENST00000378572 LIX1Q8N485 282 aa12.78□□□□□ -0.36
PRPF18-202ENST00000378572 UTP15Q8TED0 518 aaKnown RBP12.78□□□□□ -0.36
PRPF18-202ENST00000378572 RGMAQ96B86 450 aa12.78□□□□□ -0.36
PRPF18-202ENST00000378572 QRFPRQ96P65 431 aa12.78□□□□□ -0.36
PRPF18-202ENST00000378572 PRDM9Q9NQV7 894 aa12.78□□□□□ -0.36
PRPF18-202ENST00000378572 ITGB1BP2Q9UKP3 347 aa12.78□□□□□ -0.36
PRPF18-202ENST00000378572 FBXW2Q9UKT8 454 aa12.78□□□□□ -0.36
PRPF18-202ENST00000378572 WBP11Q9Y2W2 641 aaKnown RBP12.78□□□□□ -0.36
PRPF18-202ENST00000378572 MEMO1Q9Y316 297 aa12.78□□□□□ -0.36
PRPF18-202ENST00000378572 TRBV11-1A0A0K0K1C0 115 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 PLPP1O14494 284 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 NME2P1O60361 137 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 SLC22A3O75751 556 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 CLDN14O95500 239 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 NME2P22392 152 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 RFC3P40938 356 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 GSTM5P46439 218 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 STXBP1P61764 594 aaKnown RBP12.77□□□□□ -0.36
PRPF18-202ENST00000378572 CYLC2Q14093 348 aaPredicted RBP12.77□□□□□ -0.36
PRPF18-202ENST00000378572 RCAN2Q14206 197 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 SPRED3Q2MJR0 410 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 COMMD6Q7Z4G1 85 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 EID3Q8N140 333 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 OR2L5Q8NG80 312 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 OR9I1Q8NGQ6 314 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 ELP5Q8TE02 316 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 ZNF717Q9BY31 904 aaPredicted RBP12.77□□□□□ -0.36
PRPF18-202ENST00000378572 REXO4Q9GZR2 422 aaKnown RBP12.77□□□□□ -0.36
PRPF18-202ENST00000378572 PNO1Q9NRX1 252 aaKnown RBP12.77□□□□□ -0.36
PRPF18-202ENST00000378572 CCDC167Q9P0B6 97 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 CSMD1Q96PZ7 3565 aa12.77□□□□□ -0.36
PRPF18-202ENST00000378572 APCP25054 2843 aa12.77□□□□□ -0.37
PRPF18-202ENST00000378572 A0A0G2JN53 185 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 FAM234BA2RU67 622 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 PCDH7O60245 1069 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 HNRNPH1P31943 449 aaKnown RBP12.76□□□□□ -0.37
PRPF18-202ENST00000378572 BSGP35613 385 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 MEOX1P50221 254 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 RAP1GDS1P52306 607 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 CLNS1AP54105 237 aaKnown RBP12.76□□□□□ -0.37
PRPF18-202ENST00000378572 UFM1P61960 85 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 BTN3A2P78410 334 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 TGM3Q08188 693 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 STX5Q13190 355 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 PTGR1Q14914 329 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 COQ5Q5HYK3 327 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 BLOC1S3Q6QNY0 202 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 NUDT13Q86X67 352 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 SNX32Q86XE0 403 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 TMEM156Q8N614 296 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 GAL3ST3Q96A11 431 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 MS4A6EQ96DS6 147 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 LURAP1Q96LR2 239 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 F2RL3Q96RI0 385 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 DPY30Q9C005 99 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 AICDAQ9GZX7 198 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 KLHL31Q9H511 634 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 DDX31Q9H8H2 851 aaKnown RBP12.76□□□□□ -0.37
PRPF18-202ENST00000378572 KLF13Q9Y2Y9 288 aaPredicted RBP12.76□□□□□ -0.37
PRPF18-202ENST00000378572 BBIP1A8MTZ0 92 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 SH3BGRLO75368 114 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 SCELO95171 688 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 TPOP07202 933 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 ANXA4P09525 319 aaPredicted RBP12.76□□□□□ -0.37
PRPF18-202ENST00000378572 PRPS1L1P21108 318 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 TACR1P25103 407 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 PTGER1P34995 402 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 ZFP36L2P47974 494 aaKnown RBP12.76□□□□□ -0.37
PRPF18-202ENST00000378572 HLCSP50747 726 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 MLF1P58340 268 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 NCALDP61601 193 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 ZNF763Q0D2J5 394 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 SLC13A2Q13183 592 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 DPY19L1Q2PZI1 675 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 TRIM40Q6P9F5 258 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 ABHD17CQ6PCB6 329 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 GK5Q6ZS86 529 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 UBE3DQ7Z6J8 389 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 SIAH3Q8IW03 269 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 CYP4Z2PQ8N1L4 340 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 CA13Q8N1Q1 262 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.76□□□□□ -0.37
PRPF18-202ENST00000378572 TESCQ96BS2 214 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 TEX37Q96LM6 180 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 KCNC2Q96PR1 638 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 ZBTB18Q99592 522 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 TBCDQ9BTW9 1192 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 C1orf21Q9H246 121 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 NECTIN3Q9NQS3 549 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 COQ3Q9NZJ6 369 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 ZNF835Q9Y2P0 537 aa12.76□□□□□ -0.37
PRPF18-202ENST00000378572 LOC100653049A0A140TA62 436 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 TCRBV16S1A1N1A0A5B0 115 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 C19orf84I3L1E1 186 aa12.75□□□□□ -0.37
PRPF18-202ENST00000378572 SAP18O00422 153 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms