RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 TGM7Q96PF1 710 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 OR2M4Q96R27 311 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 KCNA7Q96RP8 456 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 DOHHQ9BU89 302 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 SRRDQ9UH36 339 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 SALL3Q9BXA9 1300 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 CACNA1BQ00975 2339 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 ACRP10323 421 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 CD97P48960 835 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 CNKSR3Q6P9H4 555 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 YIPF1Q9Y548 306 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 ATP6AP1Q15904 470 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 SPRYD7Q5W111 196 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 ASPGQ86U10 573 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 CARM1Q86X55 608 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 C2CD4AQ8NCU7 369 aaPredicted RBP11.93□□□□□ -0.5
VPS13A-204ENST00000376634 OR5L2Q8NGL0 311 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 IKZF4Q9H2S9 585 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 KCNK6Q9Y257 313 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 BCL9LQ86UU0 1499 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 A0A1W2PPK0 400 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 FAM159BA6NKW6 160 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF254O75437 659 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 WDPCPO95876 746 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 RNH1P13489 461 aaKnown RBP11.93□□□□□ -0.5
VPS13A-204ENST00000376634 MLLT1Q03111 559 aaPredicted RBP11.93□□□□□ -0.5
VPS13A-204ENST00000376634 SLAMF1Q13291 335 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 SOWAHAQ2M3V2 549 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 GPR22Q99680 433 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 H3BSA7 217 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 DNASE1P24855 282 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 TPRG1Q6ZUI0 275 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 ZDHHC1Q8WTX9 485 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 ARL5BQ96KC2 179 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 TMEM74Q96NL1 305 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 A0A096LPI6 279 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 H7BY64 318 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 RNF144AP50876 292 aaPredicted RBP11.93□□□□□ -0.5
VPS13A-204ENST00000376634 TEAD2Q15562 447 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 CTC1Q2NKJ3 1217 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 ESCO2Q56NI9 601 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 C22orf42Q6IC83 251 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 FRZBQ92765 325 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 PRAP1Q96NZ9 151 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 NELL2Q99435 816 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 ASF1BQ9NVP2 202 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 NEURL4Q96JN8 1562 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 LOC730098B7Z3J9 87 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 INMT-MINDY4F8WBC2 141 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 ADORA3P0DMS8 318 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 SPANXN4Q5MJ08 99 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 NCBP2-AS2Q69YL0 99 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 OR8J3Q8NGG0 315 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 TMEM175Q9BSA9 504 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 ERVK13-1Q9NX77 482 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 NFAT5O94916 1531 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 OIP5O43482 229 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 AOC2O75106 756 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 POLR2CP19387 275 aaPredicted RBP11.92□□□□□ -0.5
VPS13A-204ENST00000376634 CASP7P55210 303 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 SSX2Q16385 188 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF805Q5CZA5 627 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 RAB8BQ92930 207 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 FAM46BQ96A09 425 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 TUBGCP6Q96RT7 1819 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 MYLKQ15746 1914 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 CICQ96RK0 1608 aaPredicted RBP11.92□□□□□ -0.5
VPS13A-204ENST00000376634 DLX3O60479 287 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 P04436 131 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 CD34P28906 385 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 IDH3GP51553 393 aaPredicted RBP11.92□□□□□ -0.5
VPS13A-204ENST00000376634 NCS1P62166 190 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 CFAP77Q6ZQR2 320 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 NUP43Q8NFH3 380 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF578Q96N58 590 aaPredicted RBP11.92□□□□□ -0.5
VPS13A-204ENST00000376634 SECISBP2Q96T21 854 aaKnown RBP11.92□□□□□ -0.5
VPS13A-204ENST00000376634 TTYH3Q9C0H2 523 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 YARS2Q9Y2Z4 477 aaKnown RBP11.92□□□□□ -0.5
VPS13A-204ENST00000376634 TEX264Q9Y6I9 313 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 DOCK3Q8IZD9 2030 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 A0A087WUU8 490 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 A0A0U1RQK1 487 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 PBX1P40424 430 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 POU3F4P49335 361 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 RAB8AP61006 207 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 GSTM4Q03013 218 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 TXNDC5Q8NBS9 432 aaKnown RBP11.92□□□□□ -0.5
VPS13A-204ENST00000376634 SLC2A11Q9BYW1 496 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 TCRBV21S2A2A0A5A6 115 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 GOSR2O14653 212 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 UNGP13051 313 aaPredicted RBP11.92□□□□□ -0.5
VPS13A-204ENST00000376634 C6orf120Q7Z4R8 191 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 OR9A4Q8NGU2 314 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 JPH3Q8WXH2 748 aaPredicted RBP11.92□□□□□ -0.5
VPS13A-204ENST00000376634 PTCHD1Q96NR3 888 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 MVB12BQ9H7P6 319 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 SDHAF2Q9NX18 166 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 ELK4P28324 431 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 GINS1Q14691 196 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 KANK2Q63ZY3 851 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms