RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PIN1Q13526 163 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-203ENST00000374877 SYT14P1Q58G82 188 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF628Q5EBL2 1059 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF57Q68EA5 555 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-203ENST00000374877 SZRD1Q7Z422 152 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 AMIGO1Q86WK6 493 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.49□□□□□ -0.73
CCDC40-203ENST00000374877 SLC7A13Q8TCU3 470 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 TEFMQ96QE5 360 aaKnown RBP10.49□□□□□ -0.73
CCDC40-203ENST00000374877 HDHD5Q9BXW7 423 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 NIPAL2Q9H841 368 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 GALNT9Q9HCQ5 603 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 CTPS2Q9NRF8 586 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 MOSPD1Q9UJG1 213 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 MKI67P46013 3256 aaKnown RBP10.49□□□□□ -0.73
CCDC40-203ENST00000374877 ISM1B1AKI9 464 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 SEC14L5O43304 696 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 HCN1O60741 890 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 SRPRAP08240 638 aaKnown RBP10.49□□□□□ -0.73
CCDC40-203ENST00000374877 CTSCP53634 463 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 TBPL1P62380 186 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 PPP3R1P63098 170 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 SNAPC1Q16533 368 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 PLK5Q496M5 336 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 FAM71E1Q6IPT2 247 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 MEX3DQ86XN8 651 aaKnown RBP10.49□□□□□ -0.73
CCDC40-203ENST00000374877 TMEM145Q8NBT3 493 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 OR4M1Q8NGD0 313 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 ANGPTL6Q8NI99 470 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 KIAA1143Q96AT1 154 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-203ENST00000374877 WFDC6Q9BQY6 131 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 MVB12BQ9H7P6 319 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 B3GAT2Q9NPZ5 323 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 DMRT3Q9NQL9 472 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 CCL26Q9Y258 94 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF106Q9H2Y7 1883 aaKnown RBP10.49□□□□□ -0.73
CCDC40-203ENST00000374877 TMEM265A0A087WTH1 108 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 PDHA2P29803 388 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 RPL3P39023 403 aaKnown RBP10.49□□□□□ -0.73
CCDC40-203ENST00000374877 HYAL1Q12794 435 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 OCLNQ16625 522 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 TIGD3Q6B0B8 471 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 ACSM5Q6NUN0 579 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 ANKRD54Q6NXT1 300 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 SLC38A6Q8IZM9 456 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 OR56A3Q8NH54 315 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 FIBINQ8TAL6 211 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 UFD1Q92890 307 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 FOPNLQ96NB1 174 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 SMG9Q9H0W8 520 aaKnown RBP10.49□□□□□ -0.73
CCDC40-203ENST00000374877 OBP2AQ9NY56 170 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 MARK1Q9P0L2 795 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 NDOR1Q9UHB4 597 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 DYRK1BQ9Y463 629 aa10.49□□□□□ -0.73
CCDC40-203ENST00000374877 WASHC1A8K0Z3 465 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 ORC5O43913 435 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 ARSBP15848 533 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 ETV3P41162 512 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 AVPR1BP47901 424 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 LSM11P83369 360 aaKnown RBP eCLIP10.48□□□□□ -0.73
CCDC40-203ENST00000374877 FABP5Q01469 135 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 MAB21L1Q13394 359 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 TNK1Q13470 666 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 PDE7AQ13946 482 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 SPDYE7PQ495Y7 208 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 ZDHHC20Q5W0Z9 365 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 C22orf39Q6P5X5 142 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 HSD11B1LQ7Z5J1 315 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 HMGN2P46Q86SG4 172 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 C12orf76Q8N812 135 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-203ENST00000374877 OR4D11Q8NGI4 311 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 ECHDC3Q96DC8 303 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 MAP6Q96JE9 813 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF582Q96NG8 517 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-203ENST00000374877 QRFPRQ96P65 431 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 WACQ9BTA9 647 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 LINC00597Q9H2U6 94 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 MYNNQ9NPC7 610 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 MAT2BQ9NZL9 334 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 SEC14L3Q9UDX4 400 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 GPR52Q9Y2T5 361 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 PIPSLA2A3N6 862 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 PROM1O43490 865 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 DDX5P17844 614 aaKnown RBP10.48□□□□□ -0.73
CCDC40-203ENST00000374877 UQCRC2P22695 453 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 EVI2BP34910 448 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 RRAS2P62070 204 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-203ENST00000374877 HSPB3Q12988 150 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF767PQ75MW2 155 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 SLC37A3Q8NCC5 494 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 CHST14Q8NCH0 376 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF740Q8NDX6 193 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 OR8H1Q8NGG4 311 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 ZNF480Q8WV37 535 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 APOBEC4Q8WW27 367 aaKnown RBP10.48□□□□□ -0.73
CCDC40-203ENST00000374877 SLC9A6Q92581 669 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 PHF21AQ96BD5 680 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 PDXPQ96GD0 296 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 ZSWIM3Q96MP5 696 aa10.48□□□□□ -0.73
CCDC40-203ENST00000374877 TMED9Q9BVK6 235 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms