RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 PLEKHN1Q494U1 663 aaPredicted RBP21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 ZSCAN1Q8NBB4 408 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 NLGN4YQ8NFZ3 816 aaPredicted RBP21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 TMEM19Q96HH6 336 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 TPSD1Q9BZJ3 242 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 RNF186Q9NXI6 227 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 TAS2R3Q9NYW6 316 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 ICKQ9UPZ9 632 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 GPR52Q9Y2T5 361 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 TMEM14AQ9Y6G1 99 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 IRS2Q9Y4H2 1338 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 hCG_1807616A0A1W2PRN6 198 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 F5H0A9 414 aaPredicted RBP21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 OXSR1O95747 527 aaPredicted RBP21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 CTC1Q2NKJ3 1217 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 RPS26P11Q5JNZ5 115 aaPredicted RBP21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 PRR11Q96HE9 360 aaPredicted RBP21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 SAMD11Q96NU1 681 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 RETREG1Q9H6L5 497 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 C5AR2Q9P296 337 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 PCDHGA6Q9Y5G7 932 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 TGM5O43548 720 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 ATE1O95260 518 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 ZNF181Q2M3W8 571 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 ALDH16A1Q8IZ83 802 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 ARHGAP39Q9C0H5 1083 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 VSTM2BA6NLU5 285 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 RUNX3Q13761 415 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 IFT172Q9UG01 1749 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 MTFR2Q6P444 385 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 CRTC1Q6UUV9 634 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 TMEM25Q86YD3 366 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 TMIEQ8NEW7 156 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 TOR1AIP2Q8NFQ8 470 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 LGALS12Q96DT0 336 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 ZNF442Q9H7R0 627 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 MKS1Q9NXB0 559 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 DNAJC15Q9Y5T4 150 aa21.1■□□□□ 0.97
TM9SF3-201ENST00000371142 RORAP35398 523 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 FOXK1P85037 733 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 PLBD1Q6P4A8 553 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 CHST14Q8NCH0 376 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 MFSD8Q8NHS3 518 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 HOXB13Q92826 284 aaPredicted RBP21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 ECHDC3Q96DC8 303 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 PELOQ9BRX2 385 aaKnown RBP21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 REV1Q9UBZ9 1251 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 TRIM64BA6NI03 449 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 LSSP48449 732 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 RAB28P51157 221 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 HHEXQ03014 270 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 MALLQ13021 153 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 HAGHLQ6PII5 290 aaPredicted RBP21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 FIGLAQ6QHK4 219 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 ZDHHC1Q8WTX9 485 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 DIO2Q92813 273 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 MAGIXQ9H6Y5 334 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 CNOT4O95628 575 aaKnown RBP21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 GGT1P19440 569 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 OTX2P32243 289 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 FCRLBQ6BAA4 426 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 TRIM73Q86UV7 250 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 FAM217AQ8IXS0 508 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 SNIP1Q8TAD8 396 aaKnown RBP21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 NPR2P20594 1047 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 APIPQ96GX9 242 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 TMEM184CQ9NVA4 438 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 CUEDC1Q9NWM3 386 aaPredicted RBP21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 UBQLN2Q9UHD9 624 aa21.09■□□□□ 0.97
TM9SF3-201ENST00000371142 ADRB3P13945 408 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 ENDOUP21128 410 aaKnown RBP21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 ERVPABLB-1P60509 514 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 ELOAQ14241 798 aaKnown RBP21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 NSDHLQ15738 373 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 UBE2UQ5VVX9 321 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 ZNF551Q7Z340 670 aaPredicted RBP21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 GPR137CQ8N3F9 429 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 MAN2C1Q9NTJ4 1040 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 COL28A1Q2UY09 1125 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 STEAP4Q687X5 459 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 UGT2A3Q6UWM9 527 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 SCML4Q8N228 414 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 AKR1C4P17516 323 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 FAM189BP81408 668 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 IQCF1Q8N6M8 205 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 IL23AQ9NPF7 189 aa21.08■□□□□ 0.97
TM9SF3-201ENST00000371142 FAM205BPQ63HN1 556 aa21.08■□□□□ 0.96
TM9SF3-201ENST00000371142 FEVQ99581 238 aa21.08■□□□□ 0.96
TM9SF3-201ENST00000371142 SLC39A1Q9NY26 324 aa21.08■□□□□ 0.96
TM9SF3-201ENST00000371142 EBF1Q9UH73 591 aa21.08■□□□□ 0.96
TM9SF3-201ENST00000371142 LAMP1P11279 417 aa21.08■□□□□ 0.96
TM9SF3-201ENST00000371142 MAGEA3P43357 314 aa21.08■□□□□ 0.96
TM9SF3-201ENST00000371142 RCAN2Q14206 197 aa21.08■□□□□ 0.96
TM9SF3-201ENST00000371142 C1orf220Q5T0J3 134 aa21.08■□□□□ 0.96
TM9SF3-201ENST00000371142 BCL2L15Q5TBC7 163 aa21.08■□□□□ 0.96
TM9SF3-201ENST00000371142 MAFIPQ8WZ33 124 aa21.08■□□□□ 0.96
TM9SF3-201ENST00000371142 FUBP1Q96AE4 644 aaKnown RBP21.08■□□□□ 0.96
TM9SF3-201ENST00000371142 COPZ2Q9P299 210 aa21.08■□□□□ 0.96
TM9SF3-201ENST00000371142 PCTPQ9UKL6 214 aa21.08■□□□□ 0.96
TM9SF3-201ENST00000371142 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.07■□□□□ 0.964e-7■■□□□ 13.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms