RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 OOSP2Q86WS3 158 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 FUNDC1Q8IVP5 155 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.36□□□□□ -1.87
MCF2-202ENST00000370573 GBP7Q8N8V2 638 aaPredicted RBP3.36□□□□□ -1.87
MCF2-202ENST00000370573 AVL9Q8NBF6 648 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 IL17RDQ8NFM7 739 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 SLC22A18Q96BI1 424 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 CMTM7Q96FZ5 175 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 FCRL4Q96PJ5 515 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 LRRC37BQ96QE4 947 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 F2RL3Q96RI0 385 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 CCT7Q99832 543 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 C1orf50Q9BV19 199 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 MS4A7Q9GZW8 240 aaPredicted RBP3.36□□□□□ -1.87
MCF2-202ENST00000370573 OR51B5Q9H339 312 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 KLHL31Q9H511 634 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 LRTM1Q9HBL6 345 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 FAM60AQ9NP50 221 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 G6PC2Q9NQR9 355 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 TMEM140Q9NV12 185 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 AIG1Q9NVV5 245 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 C1orf109Q9NX04 203 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 TMEM9Q9P0T7 183 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 BAIAP2L1Q9UHR4 511 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 PILRAQ9UKJ1 303 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 POMT2Q9UKY4 750 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 RAB23Q9ULC3 237 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 SLC12A4Q9UP95 1085 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 DLGAP4Q9Y2H0 992 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 KLK4Q9Y5K2 254 aa3.36□□□□□ -1.87
MCF2-202ENST00000370573 ZFHX2Q9C0A1 2572 aaPredicted RBP3.35□□□□□ -1.87
MCF2-202ENST00000370573 ASCC3Q8N3C0 2202 aaKnown RBP3.35□□□□□ -1.87
MCF2-202ENST00000370573 LOC105369274A0A096LPK9 316 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 IGHV5-51A0A0C4DH38 117 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 LOC102723532A0A0G2JNH3 316 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 A0A0J9YY10 115 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 hCG_1807616A0A1W2PRN6 198 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 LNP1A1A4G5 178 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 CPED1A4D0V7 1026 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 SLC9B1P1A6NJY1 282 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 C4orf51C9J302 202 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 ANKRD28O15084 1053 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 CCDC22O60826 627 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 COQ9O75208 318 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 SEC22BO75396 215 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 RSL1D1O76021 490 aaKnown RBP3.35□□□□□ -1.87
MCF2-202ENST00000370573 CCNDBP1O95273 360 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 ZNF888P0CJ79 500 aaPredicted RBP3.35□□□□□ -1.87
MCF2-202ENST00000370573 BCKDHAP12694 445 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 CD59P13987 128 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 ST6GAL1P15907 406 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 HRH2P25021 359 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 CXCR2P25025 360 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 ACVR2AP27037 513 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 PIK3R1P27986 724 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 IL12AP29459 219 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 HNRNPH1P31943 449 aaKnown RBP3.35□□□□□ -1.87
MCF2-202ENST00000370573 CSF2RBP32927 897 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 CAPZBP47756 277 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 PTTG1IPP53801 180 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 RRADP55042 308 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 NME5P56597 212 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 ERVK-8P63133 956 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 CCL7P80098 99 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 ZNF33BQ06732 778 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 CSTF3Q12996 717 aaKnown RBP3.35□□□□□ -1.87
MCF2-202ENST00000370573 NAA25Q14CX7 972 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 TBCEQ15813 527 aaPredicted RBP3.35□□□□□ -1.87
MCF2-202ENST00000370573 AMZ1Q400G9 498 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 SPATS1Q496A3 300 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 ATP6AP1LQ52LC2 224 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 DEPDC1Q5TB30 811 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 IL23RQ5VWK5 629 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 FAM91A1Q658Y4 838 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 FRMPD2BQ6IN97 320 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 ARMC6Q6NXE6 501 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 IRGCQ6NXR0 463 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 FAM92BQ6ZTR7 304 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 MED25Q71SY5 747 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 TMPRSS9Q7Z410 1059 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 SPATA19Q7Z5L4 167 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 SPRED1Q7Z699 444 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 ZFAND4Q86XD8 727 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 OR4N4Q8N0Y3 316 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 KLHL36Q8N4N3 616 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 DNAJC22Q8N4W6 341 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 MFSD9Q8NBP5 474 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 OR9I1Q8NGQ6 314 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 WDR48Q8TAF3 677 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 NCSTNQ92542 709 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 UBE2E3Q969T4 207 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 REPS1Q96D71 796 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 TM4SF19Q96DZ7 209 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 C11orf24Q96F05 449 aaPredicted RBP3.35□□□□□ -1.87
MCF2-202ENST00000370573 FCRL1Q96LA6 429 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 TEX37Q96LM6 180 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 PPP3R2Q96LZ3 170 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 GNRHR2Q96P88 292 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 OR2A5Q96R48 311 aa3.35□□□□□ -1.87
MCF2-202ENST00000370573 MAP3K3Q99759 626 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms