RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 COQ8BQ96D53 544 aa12.77□□□□□ -0.37
SSR4-202ENST00000370085 C5orf34Q96MH7 638 aa12.77□□□□□ -0.37
SSR4-202ENST00000370085 WWTR1Q9GZV5 400 aa12.77□□□□□ -0.37
SSR4-202ENST00000370085 NPHS2Q9NP85 383 aa12.77□□□□□ -0.37
SSR4-202ENST00000370085 HPF1Q9NWY4 346 aa12.77□□□□□ -0.37
SSR4-202ENST00000370085 ZNF639Q9UID6 485 aa12.77□□□□□ -0.37
SSR4-202ENST00000370085 ZNF223Q9UK11 482 aaPredicted RBP12.77□□□□□ -0.37
SSR4-202ENST00000370085 ERVK-11Q9UQG0 969 aa12.77□□□□□ -0.37
SSR4-202ENST00000370085 A0A0G2JND7 137 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 TTC36A6NLP5 189 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 K7EM74 188 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 HRKO00198 91 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 WWP2O00308 870 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 CFLARO15519 480 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 SLC22A3O75751 556 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 ALDOCP09972 364 aaKnown RBP12.76□□□□□ -0.37
SSR4-202ENST00000370085 LAMP1P11279 417 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 S100A3P33764 101 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 TRHRP34981 398 aaPredicted RBP12.76□□□□□ -0.37
SSR4-202ENST00000370085 FRKP42685 505 aaPredicted RBP12.76□□□□□ -0.37
SSR4-202ENST00000370085 TNFSF10P50591 281 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 HLCSP50747 726 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 MRPS35P82673 323 aaKnown RBP12.76□□□□□ -0.37
SSR4-202ENST00000370085 DUSP2Q05923 314 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 MGAT2Q10469 447 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 TUBA3CQ13748 450 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 ZNF169Q14929 603 aaPredicted RBP12.76□□□□□ -0.37
SSR4-202ENST00000370085 EXOSC7Q15024 291 aaKnown RBP12.76□□□□□ -0.37
SSR4-202ENST00000370085 VPS26BQ4G0F5 336 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 PDCD4Q53EL6 469 aaKnown RBP12.76□□□□□ -0.37
SSR4-202ENST00000370085 TRMT12Q53H54 448 aaKnown RBP12.76□□□□□ -0.37
SSR4-202ENST00000370085 SOWAHCQ53LP3 525 aaPredicted RBP12.76□□□□□ -0.37
SSR4-202ENST00000370085 PIGGQ5H8A4 983 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 TUBA3EQ6PEY2 450 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 TMEM107Q6UX40 140 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 Q6ZS92 163 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 SZRD1Q7Z422 152 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 MAVSQ7Z434 540 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 CYP4Z2PQ8N1L4 340 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 MIER2Q8N344 545 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 ZNF615Q8N8J6 731 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 TMEM178AQ8NBL3 297 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 C16orf52Q8NHV5 167 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 DOK4Q8TEW6 326 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 OR5P2Q8WZ92 322 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 CIDECQ96AQ7 238 aaPredicted RBP12.76□□□□□ -0.37
SSR4-202ENST00000370085 MOAP1Q96BY2 351 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 ELP4Q96EB1 424 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 OR52B2Q96RD2 323 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 MFRPQ9BY79 579 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 RABEP2Q9H5N1 569 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 ZBTB20Q9HC78 741 aaPredicted RBP12.76□□□□□ -0.37
SSR4-202ENST00000370085 PLA2G3Q9NZ20 509 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 ZIM2Q9NZV7 527 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 LRFN1Q9P244 771 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 DCTN4Q9UJW0 460 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 GPR45Q9Y5Y3 372 aa12.76□□□□□ -0.37
SSR4-202ENST00000370085 PRRC2CQ9Y520 2896 aaKnown RBP12.75□□□□□ -0.37
SSR4-202ENST00000370085 RNASET2O00584 256 aaKnown RBP12.75□□□□□ -0.37
SSR4-202ENST00000370085 ACOX3O15254 700 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 CBX7O95931 251 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 IL6P05231 212 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 S1PR1P21453 382 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 KRT20P35900 424 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 MC3RP41968 323 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 RPP38P78345 283 aaKnown RBP12.75□□□□□ -0.37
SSR4-202ENST00000370085 C19orf57Q0VDD7 668 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 OR1C1Q15619 314 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 SPDYE7PQ495Y7 208 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 ZNF385BQ569K4 471 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 SLC6A19Q695T7 634 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 ZNF551Q7Z340 670 aaPredicted RBP12.75□□□□□ -0.37
SSR4-202ENST00000370085 OR2L13Q8N349 312 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 RBMXL3Q8N7X1 1067 aaKnown RBP12.75□□□□□ -0.37
SSR4-202ENST00000370085 FAM98AQ8NCA5 519 aaKnown RBP12.75□□□□□ -0.37
SSR4-202ENST00000370085 HSPBAP1Q96EW2 488 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 MAGED4Q96JG8 741 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 LCORQ96JN0 433 aaPredicted RBP12.75□□□□□ -0.37
SSR4-202ENST00000370085 SGCZQ96LD1 299 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 BBC3Q96PG8 261 aaPredicted RBP12.75□□□□□ -0.37
SSR4-202ENST00000370085 RASL10BQ96S79 203 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 NPAS2Q99743 824 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 NSRP1Q9H0G5 558 aaKnown RBP12.75□□□□□ -0.37
SSR4-202ENST00000370085 CLMPQ9H6B4 373 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 TIMMDC1Q9NPL8 285 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 FGFR1OP2Q9NVK5 253 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 FAM120CQ9NX05 1096 aaKnown RBP12.75□□□□□ -0.37
SSR4-202ENST00000370085 C19orf53Q9UNZ5 99 aaPredicted RBP12.75□□□□□ -0.37
SSR4-202ENST00000370085 PCDHGB6Q9Y5F9 930 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 SNX8Q9Y5X2 465 aa12.75□□□□□ -0.37
SSR4-202ENST00000370085 PRSS51A0A1B0GVH4 220 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 B8ZZF3 427 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 TP53I11O14683 189 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 EMC8O43402 210 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 PRKNO60260 465 aaPredicted RBP12.74□□□□□ -0.37
SSR4-202ENST00000370085 SLC25A12O75746 678 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 SOX30O94993 753 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 F10P00742 488 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 KRT16P08779 473 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 NCF2P19878 526 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms