RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 DEFB124Q8NES8 71 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 SPPL2AQ8TCT8 520 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 THAP11Q96EK4 314 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 NPLQ9BXD5 320 aaPredicted RBP16.27■□□□□ 0.19
UBE3D-203ENST00000369747 PRDM7Q9NQW5 492 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 THUMPD1Q9NXG2 353 aaKnown RBP16.27■□□□□ 0.19
UBE3D-203ENST00000369747 NDUFAF4Q9P032 175 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 ADAMTS20P59510 1910 aa16.27■□□□□ 0.19
UBE3D-203ENST00000369747 COL27A1Q8IZC6 1860 aaPredicted RBP16.26■□□□□ 0.19
UBE3D-203ENST00000369747 PRAMEF25A6NGN4 478 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 ERI3O43414 337 aaKnown RBP16.26■□□□□ 0.19
UBE3D-203ENST00000369747 ANKRD34CP0C6C1 535 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 DRD2P14416 443 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 IL7RP16871 459 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 CDK9P50750 372 aaKnown RBP16.26■□□□□ 0.19
UBE3D-203ENST00000369747 ISL1P61371 349 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 RPS26P62854 115 aaKnown RBP16.26■□□□□ 0.19
UBE3D-203ENST00000369747 CD47Q08722 323 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 TOR1AIP1Q5JTV8 583 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 HORMAD2Q8N7B1 307 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 CAMKVQ8NCB2 501 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 PSMA8Q8TAA3 256 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 NT5CQ8TCD5 201 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 HDAC2Q92769 488 aaKnown RBP16.26■□□□□ 0.19
UBE3D-203ENST00000369747 ZBED6CLQ96FA7 236 aaPredicted RBP16.26■□□□□ 0.19
UBE3D-203ENST00000369747 EPYCQ99645 322 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 DPYSL5Q9BPU6 564 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 ACSS1Q9NUB1 689 aaPredicted RBP16.26■□□□□ 0.19
UBE3D-203ENST00000369747 PLCL2Q9UPR0 1127 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 ANGPT4Q9Y264 503 aa16.26■□□□□ 0.19
UBE3D-203ENST00000369747 MRPS2Q9Y399 296 aaKnown RBP16.26■□□□□ 0.19
UBE3D-203ENST00000369747 CRHBPP24387 322 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 RRM2P31350 389 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 TPD52P55327 224 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-203ENST00000369747 ZFP36L1Q07352 338 aaKnown RBP16.25■□□□□ 0.19
UBE3D-203ENST00000369747 RGS1Q08116 209 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 MLC1Q15049 377 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 CLPPQ16740 277 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-203ENST00000369747 MEP1AQ16819 746 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 IFI44LQ53G44 452 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 RBM48Q5RL73 367 aaKnown RBP16.25■□□□□ 0.19
UBE3D-203ENST00000369747 MRM1Q6IN84 353 aaKnown RBP16.25■□□□□ 0.19
UBE3D-203ENST00000369747 LAIR2Q6ISS4 152 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 CEACAM20Q6UY09 585 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 KMT5CQ86Y97 462 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 OR2L5Q8NG80 312 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 OR8K5Q8NH50 307 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 ZCCHC10Q8TBK6 192 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 KCNC2Q96PR1 638 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 DDX18Q9NVP1 670 aaKnown RBP16.25■□□□□ 0.19
UBE3D-203ENST00000369747 PTTG2Q9NZH5 202 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 ASB4Q9Y574 426 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 WASHC1A8K0Z3 465 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 BCKDKO14874 412 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 SRPX2O60687 465 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-203ENST00000369747 JRKO75564 520 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 PRKRAO75569 313 aaKnown RBP16.25■□□□□ 0.19
UBE3D-203ENST00000369747 RFPL3O75679 317 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 ZNF888P0CJ79 500 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-203ENST00000369747 HIST1H1TP22492 207 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-203ENST00000369747 OR1E2P47887 323 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 STXBP1P61764 594 aaKnown RBP16.25■□□□□ 0.19
UBE3D-203ENST00000369747 IL18R1Q13478 541 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 SLC9A5Q14940 896 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 C6orf141Q5SZD1 244 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 FAHD1Q6P587 224 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 TNFAIP8L2Q6P589 184 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-203ENST00000369747 B3GNT6Q6ZMB0 384 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 C6orf120Q7Z4R8 191 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 SLC30A8Q8IWU4 369 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 ACOT4Q8N9L9 421 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 LZICQ8WZA0 190 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 SPRTNQ9H040 489 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-203ENST00000369747 THSD1Q9NS62 852 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 EHD3Q9NZN3 535 aa16.25■□□□□ 0.19
UBE3D-203ENST00000369747 ASPMQ8IZT6 3477 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 TMEM150CB9EJG8 249 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 H3BMH7 237 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 ATP5A1P25705 553 aaKnown RBP16.24■□□□□ 0.19
UBE3D-203ENST00000369747 RYKP34925 604 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 CLK3P49761 638 aaKnown RBP16.24■□□□□ 0.19
UBE3D-203ENST00000369747 ARFIP1P53367 373 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 INSM1Q01101 510 aaPredicted RBP16.24■□□□□ 0.19
UBE3D-203ENST00000369747 SLAMF1Q13291 335 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 LSAMPQ13449 338 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 RAPSNQ13702 412 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 ZBED5Q49AG3 693 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 REEP3Q6NUK4 255 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 ZNF773Q6PK81 442 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 GPR141Q7Z602 305 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 UTP15Q8TED0 518 aaKnown RBP16.24■□□□□ 0.19
UBE3D-203ENST00000369747 FBLIM1Q8WUP2 373 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 ZNF285Q96NJ3 590 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 FAIM2Q9BWQ8 316 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 ADNPQ9H2P0 1102 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 GLIPR2Q9H4G4 154 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 RIBC2Q9H4K1 309 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 RUBCNLQ9H714 662 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 SLC24A3Q9HC58 644 aa16.24■□□□□ 0.19
UBE3D-203ENST00000369747 A4GALTQ9NPC4 353 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms