RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CXorf36Q9H7Y0 433 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 C3orf14Q9HBI5 128 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 ZBTB20Q9HC78 741 aaPredicted RBP12.9□□□□□ -0.34
TPM3-211ENST00000368531 EQTNQ9NQ60 294 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 SIRT3Q9NTG7 399 aaPredicted RBP12.9□□□□□ -0.34
TPM3-211ENST00000368531 FAM120CQ9NX05 1096 aaKnown RBP12.9□□□□□ -0.34
TPM3-211ENST00000368531 STMN3Q9NZ72 180 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 ARMCX1Q9P291 453 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 DMXL2Q8TDJ6 3036 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 C2orf92A0A1B0GVN3 265 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 K7EM74 188 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 UPK1AO00322 258 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 PLOD2O00469 737 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 EMC8O43402 210 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 PLOD3O60568 738 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 PRAMEF2O60811 474 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 SCN2BO60939 215 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 CEACAM4O75871 244 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 GSNP06396 782 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 CCT3P49368 545 aaKnown RBP12.89□□□□□ -0.35
TPM3-211ENST00000368531 IRX1P78414 480 aaPredicted RBP12.89□□□□□ -0.35
TPM3-211ENST00000368531 ZNF155Q12901 538 aaPredicted RBP12.89□□□□□ -0.35
TPM3-211ENST00000368531 KLF10Q13118 480 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 KCNAB2Q13303 367 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 MLC1Q15049 377 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 NNATQ16517 81 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 CRB2Q5IJ48 1285 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 ACER2Q5QJU3 275 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 H3F3CQ6NXT2 135 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 SLC2A7Q6PXP3 512 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 BLOC1S3Q6QNY0 202 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 ISLR2Q6UXK2 745 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 DNAJC14Q6Y2X3 702 aaPredicted RBP12.89□□□□□ -0.35
TPM3-211ENST00000368531 MTDHQ86UE4 582 aaKnown RBP12.89□□□□□ -0.35
TPM3-211ENST00000368531 BEST3Q8N1M1 668 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 CPSF7Q8N684 471 aaKnown RBP12.89□□□□□ -0.35
TPM3-211ENST00000368531 NUP43Q8NFH3 380 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 OR5L2Q8NGL0 311 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 ABHD17AQ96GS6 310 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 ZNF354BQ96LW1 612 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 PANX1Q96RD7 426 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 NPAS2Q99743 824 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 YIPF4Q9BSR8 244 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 WWTR1Q9GZV5 400 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 ZNF71Q9NQZ8 489 aaPredicted RBP12.89□□□□□ -0.35
TPM3-211ENST00000368531 ZCCHC3Q9NUD5 404 aaKnown RBP12.89□□□□□ -0.35
TPM3-211ENST00000368531 TAS2R9Q9NYW1 312 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 PLA2G3Q9NZ20 509 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 C19orf53Q9UNZ5 99 aaPredicted RBP12.89□□□□□ -0.35
TPM3-211ENST00000368531 LHX6Q9UPM6 363 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 ERVK-11Q9UQG0 969 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 DTX4Q9Y2E6 619 aa12.89□□□□□ -0.35
TPM3-211ENST00000368531 CELSR3Q9NYQ7 3312 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 A0A087WV62 115 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 TMEM200CA6NKL6 621 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 OR6C76A6NM76 312 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 CCDC22O60826 627 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 COQ9O75208 318 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 BCAS2O75934 225 aaPredicted RBP12.88□□□□□ -0.35
TPM3-211ENST00000368531 OR2J2O76002 312 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 FAM107AO95990 144 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 ALPPP05187 535 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 CAPN3P20807 821 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 CDKN2CP42773 168 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 EMDP50402 254 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 NR0B1P51843 470 aaKnown RBP12.88□□□□□ -0.35
TPM3-211ENST00000368531 MLF1P58340 268 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 TP53BP2Q13625 1128 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 RCAN2Q14206 197 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 EBPQ15125 230 aaKnown RBP12.88□□□□□ -0.35
TPM3-211ENST00000368531 MAPKAPK3Q16644 382 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 MEP1AQ16819 746 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 C6orf10Q5SRN2 563 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 TMEM64Q6YI46 380 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 ZNF621Q6ZSS3 439 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 OR2L13Q8N349 312 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 EXD3Q8N9H8 876 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 FBXO30Q8TB52 745 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 FAM120BQ96EK7 910 aaKnown RBP12.88□□□□□ -0.35
TPM3-211ENST00000368531 ITCHQ96J02 903 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 PHF12Q96QT6 1004 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 ITPAQ9BY32 194 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 RMND5AQ9H871 391 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 FOLH1BQ9HBA9 442 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 ANKRD10Q9NXR5 420 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 MYOTQ9UBF9 498 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 PRODH2Q9UF12 536 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 TEKT2Q9UIF3 430 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 BTNL2Q9UIR0 455 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 TP53TG5Q9Y2B4 290 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 ARL2BPQ9Y2Y0 163 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 HEMK1Q9Y5R4 338 aaPredicted RBP12.88□□□□□ -0.35
TPM3-211ENST00000368531 CAPN7Q9Y6W3 813 aa12.88□□□□□ -0.35
TPM3-211ENST00000368531 TPRP12270 2363 aaKnown RBP12.88□□□□□ -0.35
TPM3-211ENST00000368531 ACACBO00763 2458 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 RNF103-CHMP3A0A140T963 221 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 RFXANKO14593 260 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 ITGA10O75578 1167 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 SLITRK5O94991 958 aa12.87□□□□□ -0.35
TPM3-211ENST00000368531 ANP32DO95626 131 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms