RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 HSPB3Q12988 150 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 IL11RAQ14626 422 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 ATXN7L3Q14CW9 347 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 MS4A13Q5J8X5 152 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 PAGE3Q5JUK9 113 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 SUSD4Q5VX71 490 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 FUT10Q6P4F1 479 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 GDPD3Q7L5L3 318 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 OTOAQ7RTW8 1153 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 COX8CQ7Z4L0 72 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 PRUNE1Q86TP1 453 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 CEP57Q86XR8 500 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 PCP2Q8IVA1 136 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 SLC43A2Q8N370 569 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 MIR7-3HGQ8N6C7 128 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 SPANXA2-OT1Q8N9U9 137 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 OR2T33Q8NG76 320 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF502Q8TBZ5 544 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 TRAF3IP1Q8TDR0 691 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 GRK7Q8WTQ7 553 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 GIMAP1Q8WWP7 306 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 RNF125Q96EQ8 232 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 RBM41Q96IZ5 413 aaKnown RBP-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 SMR3AQ99954 134 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 C19orf43Q9BQ61 176 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 C17orf62Q9BQA9 187 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 HDHD3Q9BSH5 251 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 HCAR1Q9BXC0 346 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 TEX13AQ9BXU3 409 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 NACAP1Q9BZK3 213 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 DPEP2Q9H4A9 486 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZHX3Q9H4I2 956 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 S100A14Q9HCY8 104 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 NANSQ9NR45 359 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 TAS2R16Q9NYV7 291 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 ONECUT1Q9UBC0 465 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 SLC2A6Q9UGQ3 507 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 CPSF3Q9UKF6 684 aaKnown RBP-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 AGTPBP1Q9UPW5 1226 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 TP53TG5Q9Y2B4 290 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 LIPGQ9Y5X9 500 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 KCNE2Q9Y6J6 123 aa-0.43□□□□□ -2.48
RNU6-54P-201ENST00000365563 CABIN1Q9Y6J0 2220 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 IGSF10Q6WRI0 2623 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 VWDEQ8N2E2 1590 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 RSF1Q96T23 1441 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 IGKV1-8A0A0C4DH67 115 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 hCG_1642624A0A1W2PR95 340 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF850A8MQ14 1090 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 SPECC1L-ADORA2AF8WAN1 911 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 HAS3O00219 553 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 SLC28A1O00337 649 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 MITFO75030 526 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 KIAA0754O94854 1291 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZWINTO95229 277 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 SERPING1P05155 500 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 EIF2S1P05198 315 aaKnown RBP-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 STSP08842 583 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 ALPIP09923 528 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 RAB40ALP0C0E4 278 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 THRBP10828 461 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 MPZP25189 248 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 ICAM3P32942 547 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 NF2P35240 595 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 GARSP41250 739 aaKnown RBP-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 FHITP49789 147 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 CLDN15P56746 228 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 IGBP1P78318 339 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF85Q03923 595 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF816Q0VGE8 651 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 SMARCB1Q12824 385 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 PPP2R5CQ13362 524 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 ARFRP1Q13795 201 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 BECN1Q14457 450 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF235Q14590 738 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 SLC17A1Q14916 467 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 PDCD2Q16342 344 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 DNAJC21Q5F1R6 531 aaKnown RBP-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 KLF17Q5JT82 389 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 GKAP1Q5VSY0 366 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 WDR25Q64LD2 544 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 OR5M10Q6IEU7 315 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 CCSAPQ6IQ19 270 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 RHBDD2Q6NTF9 364 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 NCEH1Q6PIU2 408 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 COX15Q7KZN9 410 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 HSD11B1LQ7Z5J1 315 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 CAMK2N1Q7Z7J9 78 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 ZNF573Q86YE8 665 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 C9orf40Q8IXQ3 194 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 RDH10Q8IZV5 341 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 THEM5Q8N1Q8 247 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 GVQW1Q8N7I0 195 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 COLGALT1Q8NBJ5 622 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 OR10S1Q8NGN2 331 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 METTL6Q8TCB7 284 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 SLC26A7Q8TE54 656 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 TCP11Q8WWU5 503 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 ESR2Q92731 530 aa-0.44□□□□□ -2.48
RNU6-54P-201ENST00000365563 UCN3Q969E3 161 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms