RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 PHC2Q8IXK0 858 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 ARFGAP2Q8N6H7 521 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 Q8NBF4 154 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 PINX1Q96BK5 328 aaKnown RBP3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 MOCOSQ96EN8 888 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 LINC00479Q96M42 142 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 TSPAN18Q96SJ8 248 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 THUMPD2Q9BTF0 503 aaKnown RBP3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 MCRIP2Q9BUT9 160 aaKnown RBP3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 MRPL13Q9BYD1 178 aaKnown RBP3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 ALG9Q9H6U8 611 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 NRN1Q9NPD7 142 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 MDFICQ9P1T7 246 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 MBD2Q9UBB5 411 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 CIDEBQ9UHD4 219 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 IKZF3Q9UKT9 509 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 EMCNQ9ULC0 261 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 TMCC3Q9ULS5 477 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 SPATA2Q9UM82 520 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 KIF3AQ9Y496 699 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 MFHAS1Q9Y4C4 1052 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 KLF2Q9Y5W3 355 aaPredicted RBP3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 NOTCH4Q99466 2003 aa3.08□□□□□ -1.92
RNU6-28P-201ENST00000362378 NPIPA5A0A0B4J1W7 369 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 TRGV8A0A0C4DH27 118 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 EPM2AB3EWF7 344 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 NPIPA5E9PKD4 350 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 H3BTX0 84 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 PDLIM1O00151 329 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 DCXO43602 365 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 ECDO95905 644 aaPredicted RBP3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 OAS1P00973 400 aaKnown RBP3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 TRIM49P0CI25 452 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 TRIM49CP0CI26 452 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 CYP2F1P24903 491 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 AXLP30530 894 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 TRPC1P48995 793 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 PRELPP51888 382 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 NDUFV3P56181 108 aaKnown RBP3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 PPIAP62937 165 aaKnown RBP3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 IRX1P78414 480 aaPredicted RBP3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 RFTN1Q14699 578 aaPredicted RBP3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 CCL14Q16627 93 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 C2CD6Q53TS8 623 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 AGAP7PQ5VUJ5 663 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 FAAP20Q6NZ36 180 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 LEG1Q6P5S2 330 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 LRRC8BQ6P9F7 803 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 MOB2Q70IA6 237 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 RPAINQ86UA6 219 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 LUZP1Q86V48 1076 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 FAM131BQ86XD5 332 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 ZNF573Q86YE8 665 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 GCNT2Q8N0V5 402 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 NFAM1Q8NET5 270 aaPredicted RBP3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 GIPC3Q8TF64 312 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 TAF15Q92804 592 aaKnown RBP eCLIP3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 DLX4Q92988 240 aaPredicted RBP3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 DTNBP1Q96EV8 351 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 SLC45A3Q96JT2 553 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 ST6GALNAC5Q9BVH7 336 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 GPR174Q9BXC1 333 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 OCR1Q9BZK8 76 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 LRRCC1Q9C099 1032 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 COG4Q9H9E3 785 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 GPR83Q9NYM4 423 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 GTSE1Q9NYZ3 720 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 NUDT4Q9NZJ9 180 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 EIF3KQ9UBQ5 218 aaKnown RBP3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 PURGQ9UJV8 347 aaKnown RBP3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 FZR1Q9UM11 496 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 RNF115Q9Y4L5 304 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 PARD3Q8TEW0 1356 aa3.07□□□□□ -1.92
RNU6-28P-201ENST00000362378 FBLL1A6NHQ2 334 aaKnown RBP3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 ASB14A6NK59 587 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 EI24O14681 340 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 ALOX15BO15296 676 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 CA3P07451 260 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 OR9G9P0C7N8 305 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 SLC35G4P0C7Q5 338 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 RNF224P0DH78 156 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 HSPA5P11021 654 aaKnown RBP3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 ADSSP30520 456 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 RIDAP52758 137 aaKnown RBP3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 TRA2BP62995 288 aaKnown RBP3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 MRPS6P82932 125 aaKnown RBP3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 SRYQ05066 204 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 ELP6Q0PNE2 266 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 ELAVL2Q12926 359 aaKnown RBP3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 CD226Q15762 336 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 ANKRD55Q3KP44 614 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 TMEM41BQ5BJD5 291 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 LINC00242Q5T6M2 205 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 TAF3Q5VWG9 929 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 NIPAL3Q6P499 406 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 SLC39A4Q6P5W5 647 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 Q6ZTC4 211 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 NET1Q7Z628 596 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms