RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 SYS1Q8N2H4 156 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ZNF655Q8N720 491 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ZNF557Q8N988 423 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SRFBP1Q8NEF9 429 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 OR6S1Q8NH40 331 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 DNAJB14Q8TBM8 379 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 THRSPQ92748 146 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 FAM162AQ96A26 154 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ECHDC3Q96DC8 303 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ELP4Q96EB1 424 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 OR5B2Q96R09 309 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 USB1Q9BQ65 265 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 MRPL9Q9BYD2 267 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 OR51J1Q9H342 316 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 PIGMQ9H3S5 423 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 C11orf16Q9NQ32 467 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 UCKL1Q9NWZ5 548 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 LIMD1Q9UGP4 676 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ANKRD20A5PA0PJZ0 165 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 MCRIP1C9JLW8 97 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 D6RAR5 112 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ATP6V1G2-DDX39BF2Z307 99 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 LILRB5O75023 590 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ENTPD6O75354 484 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SEC24DO94855 1032 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 PRAMEF1O95521 474 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 DHFRP00374 187 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 IFNA2P01563 188 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 LIMS3P0CW19 117 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 LIMS4P0CW20 117 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 CALCBP10092 127 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ALOX12P18054 663 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ELAVL4P26378 380 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 UQCRC1P31930 480 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 IFNGR2P38484 337 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 OR1G1P47890 313 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 MAN2A2P49641 1150 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 MTPNP58546 118 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 MRPS15P82914 257 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 CTBP1Q13363 440 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 EIF2S3LQ2VIR3 472 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ZNF792Q3KQV3 632 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 FAM76BQ5HYJ3 339 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 MPP7Q5T2T1 576 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SYPL2Q5VXT5 272 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 RPL13AP3Q6NVV1 102 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 C3orf33Q6P1S2 294 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 FDX2Q6P4F2 183 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ZNF600Q6ZNG1 722 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 RAB11FIP2Q7L804 512 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 TIGD4Q8IY51 512 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 CAMKK1Q8N5S9 505 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 VPS37AQ8NEZ2 397 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 OR6M1Q8NGM8 313 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 GNPDA2Q8TDQ7 276 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 MOAP1Q96BY2 351 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 NSUN5Q96P11 429 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 FAIM2Q9BWQ8 316 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SEC11CQ9BY50 192 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 RHBGQ9H310 441 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 PCDHB16Q9NRJ7 776 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 PDP1Q9P0J1 537 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 PPP4R1LQ9P1A2 415 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 KLHL9Q9P2J3 617 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 CTSFQ9UBX1 484 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 FBLN5Q9UBX5 448 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 FOXD3Q9UJU5 478 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 RNF112Q9ULX5 631 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 JAG2Q9Y219 1238 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 DOCK6Q96HP0 2047 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 C17orf113A0A1B0GUU1 675 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 OR6C70A6NIJ9 312 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 INMT-MINDY4F8WBC2 141 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 PHYHO14832 338 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 KIAA0355O15063 1070 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 GMDSO60547 372 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 RGS9O75916 674 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 AK1P00568 194 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 HLA-DPB1P04440 258 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 NR2F6P10588 404 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 PRF1P14222 555 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 HPGDP15428 266 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 CST5P28325 142 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SLC6A4P31645 630 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 MAPK8P45983 427 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 MEOX2P50222 304 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ACLYP53396 1101 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 IL2P60568 153 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 UBE2MP61081 183 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ADIGQ0VDE8 80 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SLC14A1Q13336 389 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 GRB14Q14449 540 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ZNF460Q14592 562 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SSX2Q16385 188 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 CSRP2Q16527 193 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ZNF239Q16600 458 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 TSTQ16762 297 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 FAM110CQ1W6H9 321 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SYT14P1Q58G82 188 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 NOMO2Q5JPE7 1267 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms