RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 M1APQ8TC57 530 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 TSPEARQ8WU66 669 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 FAM120BQ96EK7 910 aaKnown RBP13.82□□□□□ -0.2
CCNE1-202ENST00000357943 VMP1Q96GC9 406 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 ITCHQ96J02 903 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 ING2Q9H160 280 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 MMP25Q9NPA2 562 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 PTGFRNQ9P2B2 879 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 COPS7AQ9UBW8 275 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 BCAP29Q9UHQ4 241 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 TPRP12270 2363 aaKnown RBP13.82□□□□□ -0.2
CCNE1-202ENST00000357943 ACACBO00763 2458 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 SPENQ96T58 3664 aaKnown RBP13.82□□□□□ -0.2
CCNE1-202ENST00000357943 TRBV11-1A0A0K0K1C0 115 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 ANGPT2O15123 496 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 C1QCP02747 245 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 ITGAMP11215 1152 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 COX4I1P13073 169 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 SOAT1P35610 550 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 CLCN2P51788 898 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 PRKAG1P54619 331 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 CXADRP78310 365 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 LRRC74AQ0VAA2 488 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 AIMP2Q13155 320 aaKnown RBP13.82□□□□□ -0.2
CCNE1-202ENST00000357943 MAPRE2Q15555 327 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 GTDC1Q4AE62 458 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 SZRD1Q7Z422 152 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 C9orf40Q8IXQ3 194 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 C16orf52Q8NHV5 167 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 RP9Q8TA86 221 aaKnown RBP13.82□□□□□ -0.2
CCNE1-202ENST00000357943 CNTNAP3BQ96NU0 1288 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 CNTNAP3Q9BZ76 1288 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 ATP13A2Q9NQ11 1180 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 ZCCHC3Q9NUD5 404 aaKnown RBP13.82□□□□□ -0.2
CCNE1-202ENST00000357943 LEF1Q9UJU2 399 aaPredicted RBP13.82□□□□□ -0.2
CCNE1-202ENST00000357943 C19orf53Q9UNZ5 99 aaPredicted RBP13.82□□□□□ -0.2
CCNE1-202ENST00000357943 DTX4Q9Y2E6 619 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 KCNMB2Q9Y691 235 aa13.82□□□□□ -0.2
CCNE1-202ENST00000357943 EMC8O43402 210 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 DNAJB5O75953 348 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 PSMG1O95456 288 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 SERPINA7P05543 415 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 PTPN6P29350 595 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 CCT3P49368 545 aaKnown RBP13.81□□□□□ -0.2
CCNE1-202ENST00000357943 EMDP50402 254 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 RRADP55042 308 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 FAM91A1Q658Y4 838 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 TMEM64Q6YI46 380 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 HSDL2Q6YN16 418 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 RNF111Q6ZNA4 994 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 ZNF621Q6ZSS3 439 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 KBTBD2Q8IY47 623 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 NUP43Q8NFH3 380 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 OR7G1Q8NGA0 311 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 THAP3Q8WTV1 239 aaPredicted RBP13.81□□□□□ -0.2
CCNE1-202ENST00000357943 CRELD1Q96HD1 420 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 THOC3Q96J01 351 aaKnown RBP13.81□□□□□ -0.2
CCNE1-202ENST00000357943 NPAS2Q99743 824 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 PAIP1Q9H074 479 aaKnown RBP13.81□□□□□ -0.2
CCNE1-202ENST00000357943 C3orf14Q9HBI5 128 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 NTMQ9P121 344 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 MAP10Q9P2G4 905 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 PCDHB14Q9Y5E9 798 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 BOD1L1Q8NFC6 3051 aa13.81□□□□□ -0.2
CCNE1-202ENST00000357943 NUP214P35658 2090 aaPredicted RBP13.8□□□□□ -0.2
CCNE1-202ENST00000357943 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 RNF103-CHMP3A0A140T963 221 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 CCT8L1PA6NM43 557 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 PRAMEF2O60811 474 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 BCAS2O75934 225 aaPredicted RBP13.8□□□□□ -0.2
CCNE1-202ENST00000357943 ANP32DO95626 131 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 IFI6P09912 130 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 ITGA3P26006 1051 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 RNF4P78317 190 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 TP53BP2Q13625 1128 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 MMEL1Q495T6 779 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 SPDYE7PQ495Y7 208 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 REP15Q6BDI9 236 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 BRIX1Q8TDN6 353 aaKnown RBP13.8□□□□□ -0.2
CCNE1-202ENST00000357943 SNRNP27Q8WVK2 155 aaKnown RBP13.8□□□□□ -0.2
CCNE1-202ENST00000357943 CMTM5Q96DZ9 223 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 GIMAP5Q96F15 307 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 LIN28AQ9H9Z2 209 aaKnown RBP13.8□□□□□ -0.2
CCNE1-202ENST00000357943 EQTNQ9NQ60 294 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 PTPRQQ9UMZ3 2332 aa13.8□□□□□ -0.2
CCNE1-202ENST00000357943 TMEM200CA6NKL6 621 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 A6NL46 340 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 A8MUI8 341 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 HOXB9P17482 250 aaPredicted RBP13.79□□□□□ -0.2
CCNE1-202ENST00000357943 UQCRC2P22695 453 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 TRPC1P48995 793 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 CCL11P51671 97 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 PRR5P85299 388 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 STX5Q13190 355 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 RAPSNQ13702 412 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 EBPQ15125 230 aaKnown RBP13.79□□□□□ -0.2
CCNE1-202ENST00000357943 LRIF1Q5T3J3 769 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 DLEU7Q6UYE1 221 aa13.79□□□□□ -0.2
CCNE1-202ENST00000357943 C16orf47Q6ZP98 133 aaPredicted RBP13.79□□□□□ -0.2
CCNE1-202ENST00000357943 TRPM8Q7Z2W7 1104 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms