RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 TRIM23P36406 574 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 PTH2RP49190 550 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 RPS13P62277 151 aaKnown RBP12.29□□□□□ -0.44
SMC4-202ENST00000357388 SAMD10Q9BYL1 202 aa12.29□□□□□ -0.44
SMC4-202ENST00000357388 A0A1W2PQL4 384 aaPredicted RBP12.28□□□□□ -0.44
SMC4-202ENST00000357388 A8MU76 341 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 PYCR1P32322 319 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 VSX2P58304 361 aaPredicted RBP12.28□□□□□ -0.44
SMC4-202ENST00000357388 MEF2DQ14814 521 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 TRIM46Q7Z4K8 759 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 RBCK1Q9BYM8 510 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 POT1Q9NUX5 634 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 YJEFN3A6XGL0 299 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 ACOT7O00154 380 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 EPOP01588 193 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 SNHG28P0DPA3 235 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 PRSS3P35030 304 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 GMPRP36959 345 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 OPRL1P41146 370 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 TMEM41BQ5BJD5 291 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 SLC35F1Q5T1Q4 408 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 OR6Q1Q8NGQ2 317 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 TRMT10AQ8TBZ6 339 aaKnown RBP12.28□□□□□ -0.44
SMC4-202ENST00000357388 TFGQ92734 400 aaPredicted RBP12.28□□□□□ -0.44
SMC4-202ENST00000357388 LURAP1Q96LR2 239 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 OR2M2Q96R28 347 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 MAN2C1Q9NTJ4 1040 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 SLC17A6Q9P2U8 582 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 PCTPQ9UKL6 214 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 RNF11Q9Y3C5 154 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 RNF215Q9Y6U7 377 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 A0A1W2PS29 197 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 C20orf202A1L168 122 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 SOWAHBA6NEL2 793 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 UBFD1O14562 309 aaKnown RBP12.28□□□□□ -0.44
SMC4-202ENST00000357388 HRH2P25021 359 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 THBS2P35442 1172 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 MLC1Q15049 377 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 DUSP7Q16829 419 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 PROX2Q3B8N5 592 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 ZNF783Q6ZMS7 281 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 TMPPEQ6ZT21 453 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 NRROSQ86YC3 692 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 MR1Q95460 341 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 FZD8Q9H461 694 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 GPATCH2Q9NW75 528 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 RHCGQ9UBD6 479 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 ZC3H13Q5T200 1668 aaKnown RBP12.28□□□□□ -0.44
SMC4-202ENST00000357388 A0A1W2PPL8 197 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 SOCS2O14508 198 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 JRKO75564 520 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 FCER2P06734 321 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 SERPINF1P36955 418 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 CDCA2Q69YH5 1023 aaPredicted RBP12.28□□□□□ -0.44
SMC4-202ENST00000357388 AGTRAPQ6RW13 159 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 TMEM150AQ86TG1 271 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 ZNF808Q8N4W9 903 aaPredicted RBP12.28□□□□□ -0.44
SMC4-202ENST00000357388 ZNF578Q96N58 590 aaPredicted RBP12.28□□□□□ -0.44
SMC4-202ENST00000357388 NLE1Q9NVX2 485 aaPredicted RBP12.28□□□□□ -0.44
SMC4-202ENST00000357388 TAC3Q9UHF0 121 aa12.28□□□□□ -0.44
SMC4-202ENST00000357388 OR51F1A6NGY5 319 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 SEC14L2O76054 403 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 ARHGEF15O94989 841 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 AKAIN1P0CW23 69 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 CCL5P13501 91 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 GCGRP47871 477 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 ZNF136P52737 540 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 RRAS2P62070 204 aaPredicted RBP12.27□□□□□ -0.44
SMC4-202ENST00000357388 NIPAL4Q0D2K0 466 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.27□□□□□ -0.44
SMC4-202ENST00000357388 CTU1Q7Z7A3 348 aaKnown RBP12.27□□□□□ -0.44
SMC4-202ENST00000357388 TMEM173Q86WV6 379 aaPredicted RBP12.27□□□□□ -0.44
SMC4-202ENST00000357388 AP1M2Q9Y6Q5 423 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 BPIP17213 487 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 SHMT2P34897 504 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 CA5AP35218 305 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 PIGFQ07326 219 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 SLC10A6Q3KNW5 377 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 PGM2L1Q6PCE3 622 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 PAPD4Q6PIY7 484 aaKnown RBP12.27□□□□□ -0.44
SMC4-202ENST00000357388 DCUN1D3Q8IWE4 304 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 TEX19Q8NA77 164 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 ELP4Q96EB1 424 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 LRR1Q96L50 414 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 C12orf42Q96LP6 360 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 SACM1LQ9NTJ5 587 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 SARDHQ9UL12 918 aa12.27□□□□□ -0.44
SMC4-202ENST00000357388 OR5K4A6NMS3 321 aa12.27□□□□□ -0.45
SMC4-202ENST00000357388 MPC1LP0DKB6 136 aa12.27□□□□□ -0.45
SMC4-202ENST00000357388 DLX5P56178 289 aa12.27□□□□□ -0.45
SMC4-202ENST00000357388 RPS24P62847 133 aaKnown RBP12.27□□□□□ -0.45
SMC4-202ENST00000357388 NKX3-2P78367 333 aa12.27□□□□□ -0.45
SMC4-202ENST00000357388 GALNT2Q10471 571 aa12.27□□□□□ -0.45
SMC4-202ENST00000357388 LAPTM4AQ15012 233 aa12.27□□□□□ -0.45
SMC4-202ENST00000357388 NAPRTQ6XQN6 538 aa12.27□□□□□ -0.45
SMC4-202ENST00000357388 CFAP77Q6ZQR2 320 aa12.27□□□□□ -0.45
SMC4-202ENST00000357388 SPATC1Q76KD6 591 aa12.27□□□□□ -0.45
SMC4-202ENST00000357388 SGPP2Q8IWX5 399 aa12.27□□□□□ -0.45
SMC4-202ENST00000357388 SKA3Q8IX90 412 aa12.27□□□□□ -0.45
SMC4-202ENST00000357388 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.27□□□□□ -0.452e-6■■■■■ 54.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms