RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ASPSCR1Q9BZE9 553 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 TGIF2Q9GZN2 237 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 AKIRIN1Q9H9L7 192 aaPredicted RBP16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 CXorf21Q9HAI6 301 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 DDX18Q9NVP1 670 aaKnown RBP16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 PTGFRNQ9P2B2 879 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 AURKCQ9UQB9 309 aa16.97■□□□□ 0.31
SMARCD3-202ENST00000356800 TMX2-CTNND1H3BSU7 103 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 HMGN4O00479 90 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 OR10H2O60403 315 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 PLOD3O60568 738 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 RECKO95980 971 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 STT3AP46977 705 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 DSTNP60981 165 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 LASP1Q14847 261 aaKnown RBP16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 MINDY4Q4G0A6 757 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 HES3Q5TGS1 186 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 BHLHB9Q6PI77 547 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 RAB11FIP2Q7L804 512 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 PRSS58Q8IYP2 241 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 TMEM102Q8N9M5 508 aaPredicted RBP16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 RAB8BQ92930 207 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 YIPF4Q9BSR8 244 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 UGT2B28Q9BY64 529 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 OR51I1Q9H343 314 aa16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 AKAP7Q9P0M2 348 aaPredicted RBP16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 C19orf53Q9UNZ5 99 aaPredicted RBP16.96■□□□□ 0.31
SMARCD3-202ENST00000356800 A0A087WV62 115 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 SPAARA0A1B0GVQ0 90 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 MEN1O00255 615 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 CAPNS1P04632 268 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 IFI6P09912 130 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 ARAFP10398 606 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 S1PR1P21453 382 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 MATN1P21941 496 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 KDELR2P33947 212 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 MAP4K2Q12851 820 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 ZNF630Q2M218 657 aaPredicted RBP16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 MFSD4BQ5TF39 518 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 ERMP1Q7Z2K6 904 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 OR5D16Q8NGK9 328 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 STT3BQ8TCJ2 826 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 MIPOL1Q8TD10 442 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 OTUB1Q96FW1 271 aaPredicted RBP16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 DGAT2Q96PD7 388 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 VN1R1Q9GZP7 353 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 EQTNQ9NQ60 294 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 ZNF639Q9UID6 485 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 B3GALT1Q9Y5Z6 326 aa16.95■□□□□ 0.3
SMARCD3-202ENST00000356800 PRAMEF27A3QJZ7 478 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 HRKO00198 91 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 CNOT3O75175 753 aaKnown RBP16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 GCM2O75603 506 aaPredicted RBP16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 SLITRK5O94991 958 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 SERPINA1P01009 418 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 FCGR1AP12314 374 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 MAN2A2P49641 1150 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 PRIM2P49643 509 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 DUSP8Q13202 625 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 SERTAD2Q14140 314 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 EXOSC7Q15024 291 aaKnown RBP16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 TRIP10Q15642 601 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 MAPK11Q15759 364 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 FAM98BQ52LJ0 330 aaKnown RBP16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 OGFRL1Q5TC84 451 aaPredicted RBP16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 MFSD12Q6NUT3 480 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 OVCH1Q7RTY7 1134 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 GALNT10Q86SR1 603 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 SLC30A8Q8IWU4 369 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 NFKBIDQ8NI38 313 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 FAM110BQ8TC76 370 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 LRTOMTQ8WZ04 291 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 RIT1Q92963 219 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 RBM18Q96H35 190 aaKnown RBP16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 MS4A4EQ96PG1 132 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 DEPDC7Q96QD5 511 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 VCX3BQ9H321 246 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 THUMPD1Q9NXG2 353 aaKnown RBP16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 SAMD4AQ9UPU9 718 aaKnown RBP16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 WDFY3Q8IZQ1 3526 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 PEX1O43933 1283 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 TIPRLO75663 272 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 CBX7O95931 251 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 ZGLP1P0C6A0 271 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 FTH1P19P0C7X4 201 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 OR12D1P0DN82 309 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 RAP2AP10114 183 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 CRYBA2P53672 197 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 MAPK10P53779 464 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 TXNL4AP83876 142 aaKnown RBP16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 SCARB2Q14108 478 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 SHISA6Q6ZSJ9 500 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 WDR53Q7Z5U6 358 aaPredicted RBP16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 GALNT12Q8IXK2 581 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 VWA5B2Q8N398 1253 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 FBXO30Q8TB52 745 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 LRFN5Q96NI6 719 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 ULBP3Q9BZM4 244 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 MAGIXQ9H6Y5 334 aa16.94■□□□□ 0.3
SMARCD3-202ENST00000356800 A4GALTQ9NPC4 353 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms