RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 FUT7Q11130 342 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 NFATC3Q12968 1075 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ZNF169Q14929 603 aaPredicted RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ZNF628Q5EBL2 1059 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ACER2Q5QJU3 275 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 SLC6A19Q695T7 634 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 HSDL2Q6YN16 418 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 SLC29A4Q7RTT9 530 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 SPATA19Q7Z5L4 167 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 RPS19BP1Q86WX3 136 aaKnown RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 TICAM1Q8IUC6 712 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 DND1Q8IYX4 353 aaKnown RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 BEST3Q8N1M1 668 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ZNF843Q8N446 348 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 LIX1Q8N485 282 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 KIF2BQ8N4N8 673 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 NATD1Q8N6N6 113 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 TEX19Q8NA77 164 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 OR5L2Q8NGL0 311 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 SLC22A8Q8TCC7 542 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 CKAP2Q8WWK9 683 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 RIT1Q92963 219 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 UCN3Q969E3 161 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 EXOSC8Q96B26 276 aaKnown RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 PPCDCQ96CD2 204 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 CNRIP1Q96F85 164 aaPredicted RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 RBM18Q96H35 190 aaKnown RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 C3orf30Q96M34 536 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 MAGEB18Q96M61 343 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 TSSK3Q96PN8 268 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 BBS4Q96RK4 519 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 NPAS2Q99743 824 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 CNPPD1Q9BV87 410 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 OR8D2Q9GZM6 311 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 TRIM45Q9H8W5 580 aaPredicted RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 SLC35C2Q9NQQ7 365 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ZNF71Q9NQZ8 489 aaPredicted RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 PNPOQ9NVS9 261 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 MAT2BQ9NZL9 334 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ZNF639Q9UID6 485 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ERVK-19Q9WJR5 959 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 CFL2Q9Y281 166 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 PCDHGB6Q9Y5F9 930 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 A0A087WV62 115 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 TRAV17A0A0B4J275 112 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 MYOCOSA0A1B0GUC4 107 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 A0A1W2PS29 197 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 WASHC1A8K0Z3 465 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 PRAMEF2O60811 474 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 PEX11AO75192 247 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 WDPCPO95876 746 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 CT62P0C5K7 136 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 TACR1P25103 407 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 FRKP42685 505 aaPredicted RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 SSR4P51571 173 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 CLNS1AP54105 237 aaKnown RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 SLC37A1P57057 533 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 RNF4P78317 190 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 PSPHP78330 225 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ARG2P78540 354 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 DUSP2Q05923 314 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 C19orf57Q0VDD7 668 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 MAP4K2Q12851 820 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 TUBA3CQ13748 450 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ZNF267Q14586 743 aaPredicted RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 EBPQ15125 230 aaKnown RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 PRICKLE4Q2TBC4 344 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 RFTN2Q52LD8 501 aaPredicted RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ZNF385BQ569K4 471 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 C6orf136Q5SQH8 315 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 IL23RQ5VWK5 629 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 RPUSD3Q6P087 351 aaKnown RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 TUBA3EQ6PEY2 450 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 DGAT2L6Q6ZPD8 337 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 LINC00696Q6ZRV3 163 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 CAMKMTQ7Z624 323 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 C9orf40Q8IXQ3 194 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 SLC15A4Q8N697 577 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ZNF441Q8N8Z8 693 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 MDS2Q8NDY4 140 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 C17orf47Q8NEP4 570 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 SUN3Q8TAQ9 357 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 PIWIL2Q8TC59 973 aaKnown RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ACTRT2Q8TDY3 377 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 HAS2Q92819 552 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 CTHRC1Q96CG8 243 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ZBED6CLQ96FA7 236 aaPredicted RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 SENP5Q96HI0 755 aaPredicted RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 MAELQ96JY0 434 aaKnown RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 UTP23Q9BRU9 249 aaKnown RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 C1orf50Q9BV19 199 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 NUF2Q9BZD4 464 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 BRINP2Q9C0B6 783 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 WWTR1Q9GZV5 400 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 CDCP1Q9H5V8 836 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ACSS1Q9NUB1 689 aaPredicted RBP3.68□□□□□ -1.82
CNOT4-202ENST00000356162 ATAD3AQ9NVI7 634 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 PRODH2Q9UF12 536 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 GIMAP2Q9UG22 337 aa3.68□□□□□ -1.82
CNOT4-202ENST00000356162 EXO1Q9UQ84 846 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms