RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 IRF4Q15306 451 aa14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 SOWAHCQ53LP3 525 aaPredicted RBP14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 ABHD17CQ6PCB6 329 aa14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 ZNF793Q6ZN11 406 aa14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 C12orf76Q8N812 135 aaPredicted RBP14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 TP53I13Q8NBR0 393 aaPredicted RBP14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 GNPDA2Q8TDQ7 276 aa14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 SLC30A2Q9BRI3 323 aa14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 C1QTNF7Q9BXJ2 289 aa14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 PRRG3Q9BZD7 231 aa14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 BTBD1Q9H0C5 482 aa14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 RNF167Q9H6Y7 350 aa14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 PRDM7Q9NQW5 492 aa14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 TVP23BQ9NYZ1 205 aa14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 SNX11Q9Y5W9 270 aa14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 ALPK3Q96L96 1907 aa14.59□□□□□ -0.07
TNFSF13-202ENST00000349228 PRR19A6NJB7 356 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 ZNF670-ZNF695F2Z2N8 137 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 MYL12BO14950 172 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 EMC8O43402 210 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 PRICKLE3O43900 615 aaPredicted RBP14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 ALOX12P18054 663 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 MMP11P24347 488 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 ATP5A1P25705 553 aaKnown RBP14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 MPIP34949 423 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 GJA4P35212 333 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 BCL6P41182 706 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 RPS21P63220 83 aaKnown RBP14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 EFNB1P98172 346 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 SGCGQ13326 291 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 GINS1Q14691 196 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 C3orf38Q5JPI3 329 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 SZRD1Q7Z422 152 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 ZER1Q7Z7L7 766 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 HDDC3Q8N4P3 179 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 AMER3Q8N944 861 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 ACOT4Q8N9L9 421 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 MORN4Q8NDC4 146 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 SETD6Q8TBK2 473 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 HPS1Q92902 700 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 C1QTNF2Q9BXJ5 285 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 POLR2J2Q9GZM3 115 aaKnown RBP14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 MTIF3Q9H2K0 278 aaKnown RBP14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 OSGEPL1Q9H4B0 414 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 POLE4Q9NR33 117 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 LYARQ9NX58 379 aaKnown RBP14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 SNX7Q9UNH6 387 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 SLC17A4Q9Y2C5 497 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 OR1A2Q9Y585 309 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 TCF20Q9UGU0 1960 aaKnown RBP14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 HYKKA2RU49 373 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 M0R3H8 397 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 DLGAP3O95886 979 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 APODP05090 189 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 CMPK1P30085 196 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 FEN1P39748 380 aaKnown RBP14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 CRYBB2P43320 205 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 STXBP1P61764 594 aaKnown RBP14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 RUNX1T1Q06455 604 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 SLC13A2Q13183 592 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 TMEM44Q2T9K0 475 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 MRGPREQ86SM8 312 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 OR5D16Q8NGK9 328 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 WDFY2Q96P53 400 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 NRTNQ99748 197 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 CNPPD1Q9BV87 410 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 IMP3Q9NV31 184 aaKnown RBP14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 QPCTLQ9NXS2 382 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 TESQ9UGI8 421 aaKnown RBP14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 SLC13A4Q9UKG4 626 aa14.58□□□□□ -0.08
TNFSF13-202ENST00000349228 PRRC2BQ5JSZ5 2229 aaKnown RBP14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 A0A1W2PR48 441 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 SNPHO15079 494 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 ERI3O43414 337 aaKnown RBP14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 TLX2O43763 284 aaPredicted RBP14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 CHRM4P08173 479 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 RAB40BQ12829 278 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 HYAL2Q12891 473 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 CEBPEQ15744 281 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 DUSP6Q16828 381 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 UAP1L1Q3KQV9 507 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 SLC48A1Q6P1K1 146 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 FBXO46Q6PJ61 603 aaPredicted RBP14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 MFSD9Q8NBP5 474 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 AICDAQ9GZX7 198 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 KLHL25Q9H0H3 589 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 KLHL31Q9H511 634 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 KCNK12Q9HB15 430 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 SMURF1Q9HCE7 757 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 FGF20Q9NP95 211 aaPredicted RBP14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 EXOSC4Q9NPD3 245 aaKnown RBP14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 MAN2C1Q9NTJ4 1040 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 CES1P1Q9UKY3 287 aa14.57□□□□□ -0.08
TNFSF13-202ENST00000349228 GSAPA4D1B5 854 aa14.56□□□□□ -0.08
TNFSF13-202ENST00000349228 SLC35F4A4IF30 521 aa14.56□□□□□ -0.08
TNFSF13-202ENST00000349228 STK25O00506 426 aa14.56□□□□□ -0.08
TNFSF13-202ENST00000349228 ERAL1O75616 437 aaKnown RBP14.56□□□□□ -0.08
TNFSF13-202ENST00000349228 HMGN2P05204 90 aaKnown RBP14.56□□□□□ -0.08
TNFSF13-202ENST00000349228 IGFBP1P08833 259 aaPredicted RBP14.56□□□□□ -0.08
TNFSF13-202ENST00000349228 CKMT1AP12532 417 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms