RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 GM2AP17900 193 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 CLCN4P51793 760 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 KCNAB2Q13303 367 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 UPP1Q16831 310 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 OR4F6Q8NGB9 312 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 BIRC7Q96CA5 298 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 GIMAP5Q96F15 307 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 ZNF419Q96HQ0 510 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 IGSF21Q96ID5 467 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 C7orf34Q96L11 122 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 KCNC2Q96PR1 638 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 PAAF1Q9BRP4 392 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 TPT1P8Q9HAU6 139 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 ZBTB20Q9HC78 741 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 MYEF2Q9P2K5 600 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 TNFRSF10BO14763 440 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 RGS13O14921 159 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 SDC3O75056 442 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 BEST1O76090 585 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 GSRP00390 522 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 PLGP00747 810 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 MAGEA11P43364 429 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 PLGLB1Q02325 96 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 PPP1R8Q12972 351 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 PDZK1IP1Q13113 114 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 ZNF311Q5JNZ3 666 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 KIAA1161Q6NSJ0 714 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 OR6M1Q8NGM8 313 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 GPR62Q9BZJ7 368 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 KIF25Q9UIL4 384 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 NOP16Q9Y3C1 178 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 KCPQ6ZWJ8 1503 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 PMM2O15305 246 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 KLF8O95600 359 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 ACVR2AP27037 513 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 HCAR3P49019 387 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 ARSFP54793 590 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 NRG3P56975 720 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 HTRA3P83110 453 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 TAS1R3Q7RTX0 852 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 OR2AJ1Q8NGZ0 328 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 BADQ92934 168 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 TOLLIPQ9H0E2 274 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 EMC7Q9NPA0 242 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 FAM118AQ9NWS6 357 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 CYP8B1Q9UNU6 501 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 RNF11Q9Y3C5 154 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 TERTO14746 1132 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 CSNK2A2P19784 350 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 FRG2Q64ET8 278 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 HSDL2Q6YN16 418 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 LINC00518Q8N0U6 118 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 CNIH3Q8TBE1 160 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 NPRL2Q8WTW4 380 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 FRG2BQ96QU4 278 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 VRK1Q99986 396 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 AMBNQ9NP70 447 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 VAPAQ9P0L0 249 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 NALCNQ8IZF0 1738 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 GLOD5A6NK44 160 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 FAM72CH0Y354 149 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 FANCGO15287 622 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 PET100P0DJ07 73 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 ARL3P36405 182 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 RNF144AP50876 292 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 SELENBP1Q13228 472 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 EIPR1Q53HC9 387 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 FAM72AQ5TYM5 149 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 FAM72DQ6L9T8 149 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 GSG1LQ6UXU4 331 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 TPRG1Q6ZUI0 275 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 FAM72BQ86X60 149 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 GIMAP1Q8WWP7 306 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 ADAMTS14Q8WXS8 1223 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 C16orf70Q9BSU1 422 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 NDC1Q9BTX1 674 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 SPNS1Q9H2V7 528 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 NT5DC2Q9H857 520 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 B4GALT6Q9UBX8 382 aa10.6□□□□□ -0.71
SMARCE1-202ENST00000348513 E7EQ34 232 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 GOSR2O14653 212 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 DLX3O60479 287 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 RHOP08100 348 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 T-ENOLP0DO92 83 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 HOXB1P14653 301 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 AGXTP21549 392 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 ADH6P28332 368 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 DNAJA1P31689 397 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 SOX4Q06945 474 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 ABLIM2Q6H8Q1 611 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 SLC16A13Q7RTY0 426 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 TMPRSS9Q7Z410 1059 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 GLB1L3Q8NCI6 653 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 DTD1Q8TEA8 209 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 LRRC15Q8TF66 581 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 RAB3CQ96E17 227 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 PKP4Q99569 1192 aa10.59□□□□□ -0.71
SMARCE1-202ENST00000348513 GIMAP2Q9UG22 337 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms