RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 PON2Q15165 354 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 OR4F3Q6IEY1 312 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 SLC2A7Q6PXP3 512 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 FAM129CQ86XR2 697 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 DCBLD1Q8N8Z6 715 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 LRRC46Q96FV0 321 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 LRR1Q96L50 414 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 SMOXQ9NWM0 555 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 UBE2J1Q9Y385 318 aaPredicted RBP12.73□□□□□ -0.37
COL6A3-202ENST00000347401 MEIOCA2RUB1 952 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 GAPDHSO14556 408 aaPredicted RBP12.73□□□□□ -0.37
COL6A3-202ENST00000347401 TRAPPC2P0DI81 140 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 TRAPPC2BP0DI82 140 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 GGT1P19440 569 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 ARSJQ5FYB0 599 aaPredicted RBP12.73□□□□□ -0.37
COL6A3-202ENST00000347401 POMZP3Q6PJE2 187 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 RETREG3Q86VR2 466 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 OR51G2Q8NGK0 314 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 BCO2Q9BYV7 579 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 FBXL3Q9UKT7 428 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 RICTORQ6R327 1708 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 APBB3O95704 486 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 PCGF2P35227 344 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 TAS2R30P59541 319 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 MAP2K5Q13163 448 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 PMS2P3Q13401 168 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 NCBP2-AS2Q69YL0 99 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 TICAM1Q8IUC6 712 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 FBXL18Q96ME1 805 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 HBEGFQ99075 208 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 NIPAL2Q9H841 368 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 VRTNQ9H8Y1 702 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 BOLA2-SMG1P6H3BVE0 249 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 SEPT4O43236 478 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 TGOLN2O43493 480 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 AHSGP02765 367 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 KDELR2P33947 212 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 GCGRP47871 477 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 PSMD8P48556 350 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 TAP2Q03519 686 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 NBPF12Q5TAG4 269 aaPredicted RBP12.73□□□□□ -0.37
COL6A3-202ENST00000347401 STEAP4Q687X5 459 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 GPR142Q7Z601 462 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 KIAA0907Q7Z7F0 614 aaPredicted RBP12.73□□□□□ -0.37
COL6A3-202ENST00000347401 SLC43A2Q8N370 569 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 AGPAT4Q9NRZ5 378 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 ASF1BQ9NVP2 202 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 ADAMTS6Q9UKP5 1117 aa12.73□□□□□ -0.37
COL6A3-202ENST00000347401 ZBTB7AO95365 584 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 BPIP17213 487 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 CD9P21926 228 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 TIA1P31483 386 aaKnown RBP eCLIP12.72□□□□□ -0.37
COL6A3-202ENST00000347401 CA5AP35218 305 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 ELP2Q6IA86 826 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 HIST2H3AQ71DI3 136 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 NANPQ8TBE9 248 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 POLDIP3Q9BY77 421 aaKnown RBP12.72□□□□□ -0.37
COL6A3-202ENST00000347401 ADAM18Q9Y3Q7 739 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 TTC24A2A3L6 582 aaPredicted RBP12.72□□□□□ -0.37
COL6A3-202ENST00000347401 GGT3PA6NGU5 568 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 RNF225M0QZC1 329 aaPredicted RBP12.72□□□□□ -0.37
COL6A3-202ENST00000347401 ARPC5O15511 151 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 GGT2P36268 569 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 FAM214AQ32MH5 1076 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 KCTD20Q7Z5Y7 419 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 OR2T11Q8NH01 316 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 TM9SF4Q92544 642 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 J3KR12 359 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 FNDC9Q8TBE3 224 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 ADAMTS14Q8WXS8 1223 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 RADILQ96JH8 1075 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 KCNIP1Q9NZI2 227 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 LILRB5O75023 590 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 TOXO94900 526 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 EGFP01133 1207 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 GDF10P55107 478 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 TBCEQ15813 527 aaPredicted RBP12.72□□□□□ -0.37
COL6A3-202ENST00000347401 AWAT2Q6E213 333 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 LPCAT3Q6P1A2 487 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 GORASP2Q9H8Y8 452 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 C14orf119Q9NWQ9 140 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 DUS2Q9NX74 493 aaKnown RBP12.72□□□□□ -0.37
COL6A3-202ENST00000347401 ABRACLQ9P1F3 81 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 NIPSNAP2O75323 286 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 BMP1P13497 986 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 EVI2BP34910 448 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 KIAA1211LQ6NV74 962 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 C3orf58Q8NDZ4 430 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 ADAMTS16Q8TE57 1224 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 SAMD10Q9BYL1 202 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 EBF1Q9UH73 591 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 SPO11Q9Y5K1 396 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 RNF212BA8MTL3 300 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 STBD1O95210 358 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 H2BFMP0C1H6 154 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 SLAMF1Q13291 335 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 ZNF619Q8N2I2 560 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 TMEM248Q9NWD8 314 aa12.72□□□□□ -0.37
COL6A3-202ENST00000347401 ZFR2Q9UPR6 939 aaKnown RBP12.72□□□□□ -0.37
COL6A3-202ENST00000347401 ADAM12O43184 909 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms