RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ADARB1P78563 741 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 PPP2R2BQ00005 443 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 ZP2Q05996 745 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 RBBP4Q09028 425 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 TP53BP2Q13625 1128 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 IQCCQ4KMZ1 466 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 OR2T5Q6IEZ7 315 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SZRD1Q7Z422 152 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 TSEN54Q7Z6J9 526 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SVOPLQ8N434 492 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 C19orf47Q8N9M1 422 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SRFBP1Q8NEF9 429 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 OR2T29Q8NH02 315 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 PSMA8Q8TAA3 256 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 RAB8BQ92930 207 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SDCCAG3Q96C92 435 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 CLIP3Q96DZ5 547 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 CNRIP1Q96F85 164 aaPredicted RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 MAGED4Q96JG8 741 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 C7orf34Q96L11 122 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 BBS4Q96RK4 519 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 DOHHQ9BU89 302 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 EPB41L1Q9H4G0 881 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 TM9SF3Q9HD45 589 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 PNPLA3Q9NST1 481 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 TMEM74BQ9NUR3 256 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 FAIMQ9NVQ4 179 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 ADPRHL2Q9NX46 363 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 EHD3Q9NZN3 535 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 MRPS2Q9Y399 296 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 WDR87Q6ZQQ6 2873 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 A0A0J9YY10 115 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 TLR4O00206 839 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 HCRTR1O43613 425 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 HS6ST1O60243 411 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 HPRP00739 348 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 C9P02748 559 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 CSF2P04141 144 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 DCNP07585 359 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SLC35G6P0C7Q6 338 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SMIM10L1P0DMW3 83 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 ATP6V1B1P15313 513 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 HOXB6P17509 224 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 BCKDHBP21953 392 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 RGS19P49795 217 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 ARFIP1P53367 373 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 PCBP3P57721 371 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 OLR1P78380 273 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 ID3Q02535 119 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 TGM3Q08188 693 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 MLC1Q15049 377 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 C21orf62-AS1Q17RA5 79 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 ZNF630Q2M218 657 aaPredicted RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 DEFB134Q4QY38 66 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 ZBTB37Q5TC79 503 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SLC48A1Q6P1K1 146 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SHQ1Q6PI26 577 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SLC44A2Q8IWA5 706 aaPredicted RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 TMEFF1Q8IYR6 380 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SLC7A5P1Q8MH63 180 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SUN3Q8TAQ9 357 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 BAHD1Q8TBE0 780 aaPredicted RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SPPL2AQ8TCT8 520 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 LMX1AQ8TE12 382 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 KLHL6Q8WZ60 621 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 SMIM10Q96HG1 83 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 HSPA12BQ96MM6 686 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 MBOAT4Q96T53 435 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 TOR3AQ9H497 397 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 CLK4Q9HAZ1 481 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 USE1Q9NZ43 259 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 PTTG2Q9NZH5 202 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 ANKMY1Q9P2S6 941 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 THEGQ9P2T0 379 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 FAM32AQ9Y421 112 aaKnown RBP8.69□□□□□ -1.02
ATG4A-202ENST00000345734 ENTPD2Q9Y5L3 495 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 FRYLO94915 3013 aa8.69□□□□□ -1.02
ATG4A-202ENST00000345734 ASXL3Q9C0F0 2248 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 TMEM131Q92545 1883 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 OR5K3A6NET4 321 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 PRAMEF25A6NGN4 478 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 ZNF860A6NHJ4 632 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 H3BNH8 94 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 HMGN4O00479 90 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 CBFA2T3O75081 653 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 GUCY1B2O75343 617 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 H6PDO95479 791 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 TP53P04637 393 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 HOXB4P17483 251 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 FUT4P22083 530 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 NTSP30990 170 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 TSFMP43897 325 aaKnown RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 OR1E2P47887 323 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 MAPK11Q15759 364 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 GPR19Q15760 415 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 USP51Q70EK9 711 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 PRSS41Q7RTY9 318 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 PIWIL3Q7Z3Z3 882 aaKnown RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 SPEM1Q8N4L4 309 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 CADM4Q8NFZ8 388 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms