RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PSORS1C1Q9UIG5 152 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 GPR52Q9Y2T5 361 aa17.23■□□□□ 0.35
SMC4-201ENST00000344722 SLC43A1O75387 559 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 RBMS1P29558 406 aaKnown RBP17.22■□□□□ 0.35
SMC4-201ENST00000344722 PTH2RP49190 550 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 ZMYND11Q15326 602 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 FAM214AQ32MH5 1076 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 DCUN1D3Q8IWE4 304 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 SLC6A7Q99884 636 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 PDLIM7Q9NR12 457 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 TTC34A8MYJ7 566 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 ARPC1BO15143 372 aaKnown RBP17.22■□□□□ 0.35
SMC4-201ENST00000344722 CYP17A1P05093 508 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 SFTPBP07988 381 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 MPP7Q5T2T1 576 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 ALG1LQ6GMV1 187 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 PRSS55Q6UWB4 352 aaPredicted RBP17.22■□□□□ 0.35
SMC4-201ENST00000344722 ZNF534Q76KX8 674 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 DNAJC5GQ8N7S2 189 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 TFGQ92734 400 aaPredicted RBP17.22■□□□□ 0.35
SMC4-201ENST00000344722 SGTBQ96EQ0 304 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 HS6ST2Q96MM7 605 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 SLC28A3Q9HAS3 691 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 UPK3BL1B0FP48 263 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 UPK3BL2E5RIL1 263 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 IFNA2P01563 188 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 S100PP25815 95 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 MAGEA11P43364 429 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 PREPP48147 710 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 FPGSQ05932 587 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 KIAA1143Q96AT1 154 aaPredicted RBP17.22■□□□□ 0.35
SMC4-201ENST00000344722 TMEM41AQ96HV5 264 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 GAL3ST4Q96RP7 486 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 KCNIP3Q9Y2W7 256 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 FER1L4A9Z1Z3 1794 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 BLOC1S5-TXNDC5H3BN57 136 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 HSPA12AO43301 675 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 SGCEO43556 437 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 EPHX1P07099 455 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 DPP6P42658 865 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 IRF5Q13568 498 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 LRRTM4Q86VH4 590 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 PELI3Q8N2H9 469 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 CLMPQ9H6B4 373 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 OR6C2Q9NZP2 312 aa17.22■□□□□ 0.35
SMC4-201ENST00000344722 PHRF1Q9P1Y6 1649 aaKnown RBP17.22■□□□□ 0.35
SMC4-201ENST00000344722 DUSP11O75319 330 aaKnown RBP17.21■□□□□ 0.35
SMC4-201ENST00000344722 LAG3P18627 525 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 ENDOUP21128 410 aaKnown RBP17.21■□□□□ 0.35
SMC4-201ENST00000344722 NAA10P41227 235 aaPredicted RBP17.21■□□□□ 0.35
SMC4-201ENST00000344722 MAPK14Q16539 360 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 DHRS4L2Q6PKH6 230 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.21■□□□□ 0.352e-6■■■■■ 54.3
SMC4-201ENST00000344722 NTN4Q9HB63 628 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 FBXO8Q9NRD0 319 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 TRBV23OR9-2A0A075B6M9 112 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.21■□□□□ 0.35
SMC4-201ENST00000344722 EEF1E1-BLOC1S5C9J1V9 151 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 H3BSH0 61 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 CXCL14O95715 111 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 RAB8AP61006 207 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 RING1Q06587 406 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 SUSD1Q6UWL2 747 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 UNC5DQ6UXZ4 953 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 GPRIN1Q7Z2K8 1008 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 NPAS4Q8IUM7 802 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 OR6N2Q8NGY6 317 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 ELP4Q96EB1 424 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 EMC8O43402 210 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 LCMT2O60294 686 aaKnown RBP17.21■□□□□ 0.35
SMC4-201ENST00000344722 DNAJB6O75190 326 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 NFATC1O95644 943 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 GIFP27352 417 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 SVBPQ8N300 66 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 NT5C3BQ969T7 300 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 ISL2Q96A47 359 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 ZNF416Q9BWM5 594 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.21■□□□□ 0.35
SMC4-201ENST00000344722 A0A0G2JLL6 359 aaPredicted RBP17.21■□□□□ 0.35
SMC4-201ENST00000344722 EIF3FO00303 357 aaPredicted RBP17.21■□□□□ 0.35
SMC4-201ENST00000344722 ZNF208O43345 1280 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 HNF1BP35680 557 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 MEF2AQ02078 507 aaPredicted RBP17.21■□□□□ 0.35
SMC4-201ENST00000344722 PRRT2Q7Z6L0 340 aaPredicted RBP17.21■□□□□ 0.35
SMC4-201ENST00000344722 OR5W2Q8NH69 310 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 HUS1BQ8NHY5 278 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 CD200R1Q8TD46 325 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 TESCQ96BS2 214 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 FAM46AQ96IP4 442 aaKnown RBP17.21■□□□□ 0.35
SMC4-201ENST00000344722 ZNF649Q9BS31 505 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 ALG8Q9BVK2 526 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 BOLA1Q9Y3E2 137 aa17.21■□□□□ 0.35
SMC4-201ENST00000344722 UBBP0CG47 229 aa17.2■□□□□ 0.34
SMC4-201ENST00000344722 UBCP0CG48 685 aaKnown RBP17.2■□□□□ 0.34
SMC4-201ENST00000344722 UGT2B7P16662 529 aa17.2■□□□□ 0.34
SMC4-201ENST00000344722 PRDX3P30048 256 aaKnown RBP17.2■□□□□ 0.34
SMC4-201ENST00000344722 DAPP51397 102 aa17.2■□□□□ 0.34
SMC4-201ENST00000344722 WDR5P61964 334 aaKnown RBP17.2■□□□□ 0.34
SMC4-201ENST00000344722 RPS27AP62979 156 aaKnown RBP17.2■□□□□ 0.34
SMC4-201ENST00000344722 UBA52P62987 128 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms